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Page 1
State-level tracking of COVID-19 in the United States.
Unwin HJT, Mishra S, Bradley VC, Gandy A, Mellan TA, Coupland H, Ish-Horowicz J, Vollmer MAC, Whittaker C, Filippi SL, Xi X, Monod M, Ratmann O, Hutchinson M, Valka F, Zhu H, Hawryluk I, Milton P, Ainslie KEC, Baguelin M, Boonyasiri A, Brazeau NF, Cattarino L, Cucunuba Z, Cuomo-Dannenburg G, Dorigatti I, Eales OD, Eaton JW, van Elsland SL, FitzJohn RG, Gaythorpe KAM, Green W, Hinsley W, Jeffrey B, Knock E, Laydon DJ, Lees J, Nedjati-Gilani G, Nouvellet P, Okell L, Parag KV, Siveroni I, Thompson HA, Walker P, Walters CE, Watson OJ, Whittles LK, Ghani AC, Ferguson NM, Riley S, Donnelly CA, Bhatt S, Flaxman S. Unwin HJT, et al. Among authors: eales od. Nat Commun. 2020 Dec 3;11(1):6189. doi: 10.1038/s41467-020-19652-6. Nat Commun. 2020. PMID: 33273462 Free PMC article.
Response to COVID-19 in South Korea and implications for lifting stringent interventions.
Dighe A, Cattarino L, Cuomo-Dannenburg G, Skarp J, Imai N, Bhatia S, Gaythorpe KAM, Ainslie KEC, Baguelin M, Bhatt S, Boonyasiri A, Brazeau NF, Cooper LV, Coupland H, Cucunuba Z, Dorigatti I, Eales OD, van Elsland SL, FitzJohn RG, Green WD, Haw DJ, Hinsley W, Knock E, Laydon DJ, Mellan T, Mishra S, Nedjati-Gilani G, Nouvellet P, Pons-Salort M, Thompson HA, Unwin HJT, Verity R, Vollmer MAC, Walters CE, Watson OJ, Whittaker C, Whittles LK, Ghani AC, Donnelly CA, Ferguson NM, Riley S. Dighe A, et al. Among authors: eales od. BMC Med. 2020 Oct 9;18(1):321. doi: 10.1186/s12916-020-01791-8. BMC Med. 2020. PMID: 33032601 Free PMC article.
Database of epidemic trends and control measures during the first wave of COVID-19 in mainland China.
Fu H, Wang H, Xi X, Boonyasiri A, Wang Y, Hinsley W, Fraser KJ, McCabe R, Olivera Mesa D, Skarp J, Ledda A, Dewé T, Dighe A, Winskill P, van Elsland SL, Ainslie KEC, Baguelin M, Bhatt S, Boyd O, Brazeau NF, Cattarino L, Charles G, Coupland H, Cucunuba ZM, Cuomo-Dannenburg G, Donnelly CA, Dorigatti I, Eales OD, FitzJohn RG, Flaxman S, Gaythorpe KAM, Ghani AC, Green WD, Hamlet A, Hauck K, Haw DJ, Jeffrey B, Laydon DJ, Lees JA, Mellan T, Mishra S, Nedjati-Gilani G, Nouvellet P, Okell L, Parag KV, Ragonnet-Cronin M, Riley S, Schmit N, Thompson HA, Unwin HJT, Verity R, Vollmer MAC, Volz E, Walker PGT, Walters CE, Watson OJ, Whittaker C, Whittles LK, Imai N, Bhatia S, Ferguson NM. Fu H, et al. Among authors: eales od. Int J Infect Dis. 2021 Jan;102:463-471. doi: 10.1016/j.ijid.2020.10.075. Epub 2020 Oct 31. Int J Infect Dis. 2021. PMID: 33130212 Free PMC article.
Reduction in mobility and COVID-19 transmission.
Nouvellet P, Bhatia S, Cori A, Ainslie KEC, Baguelin M, Bhatt S, Boonyasiri A, Brazeau NF, Cattarino L, Cooper LV, Coupland H, Cucunuba ZM, Cuomo-Dannenburg G, Dighe A, Djaafara BA, Dorigatti I, Eales OD, van Elsland SL, Nascimento FF, FitzJohn RG, Gaythorpe KAM, Geidelberg L, Green WD, Hamlet A, Hauck K, Hinsley W, Imai N, Jeffrey B, Knock E, Laydon DJ, Lees JA, Mangal T, Mellan TA, Nedjati-Gilani G, Parag KV, Pons-Salort M, Ragonnet-Cronin M, Riley S, Unwin HJT, Verity R, Vollmer MAC, Volz E, Walker PGT, Walters CE, Wang H, Watson OJ, Whittaker C, Whittles LK, Xi X, Ferguson NM, Donnelly CA. Nouvellet P, et al. Among authors: eales od. Nat Commun. 2021 Feb 17;12(1):1090. doi: 10.1038/s41467-021-21358-2. Nat Commun. 2021. PMID: 33597546 Free PMC article.
Anonymised and aggregated crowd level mobility data from mobile phones suggests that initial compliance with COVID-19 social distancing interventions was high and geographically consistent across the UK.
Jeffrey B, Walters CE, Ainslie KEC, Eales O, Ciavarella C, Bhatia S, Hayes S, Baguelin M, Boonyasiri A, Brazeau NF, Cuomo-Dannenburg G, FitzJohn RG, Gaythorpe K, Green W, Imai N, Mellan TA, Mishra S, Nouvellet P, Unwin HJT, Verity R, Vollmer M, Whittaker C, Ferguson NM, Donnelly CA, Riley S. Jeffrey B, et al. Wellcome Open Res. 2020 Jul 17;5:170. doi: 10.12688/wellcomeopenres.15997.1. eCollection 2020. Wellcome Open Res. 2020. PMID: 32954015 Free PMC article.
Resurgence of SARS-CoV-2: Detection by community viral surveillance.
Riley S, Ainslie KEC, Eales O, Walters CE, Wang H, Atchison C, Fronterre C, Diggle PJ, Ashby D, Donnelly CA, Cooke G, Barclay W, Ward H, Darzi A, Elliott P. Riley S, et al. Science. 2021 May 28;372(6545):990-995. doi: 10.1126/science.abf0874. Epub 2021 Apr 23. Science. 2021. PMID: 33893241 Free PMC article.
Dynamics of competing SARS-CoV-2 variants during the Omicron epidemic in England.
Eales O, de Oliveira Martins L, Page AJ, Wang H, Bodinier B, Tang D, Haw D, Jonnerby J, Atchison C, Ashby D, Barclay W, Taylor G, Cooke G, Ward H, Darzi A, Riley S, Elliott P, Donnelly CA, Chadeau-Hyam M. Eales O, et al. Nat Commun. 2022 Jul 28;13(1):4375. doi: 10.1038/s41467-022-32096-4. Nat Commun. 2022. PMID: 35902613 Free PMC article.
Dynamics of a national Omicron SARS-CoV-2 epidemic during January 2022 in England.
Elliott P, Eales O, Bodinier B, Tang D, Wang H, Jonnerby J, Haw D, Elliott J, Whitaker M, Walters CE, Atchison C, Diggle PJ, Page AJ, Trotter AJ, Ashby D, Barclay W, Taylor G, Ward H, Darzi A, Cooke GS, Chadeau-Hyam M, Donnelly CA. Elliott P, et al. Nat Commun. 2022 Aug 3;13(1):4500. doi: 10.1038/s41467-022-32121-6. Nat Commun. 2022. PMID: 35922409 Free PMC article.
Exponential growth, high prevalence of SARS-CoV-2, and vaccine effectiveness associated with the Delta variant.
Elliott P, Haw D, Wang H, Eales O, Walters CE, Ainslie KEC, Atchison C, Fronterre C, Diggle PJ, Page AJ, Trotter AJ, Prosolek SJ; COVID-19 Genomics UK (COG-UK) Consortium11‡; Ashby D, Donnelly CA, Barclay W, Taylor G, Cooke G, Ward H, Darzi A, Riley S. Elliott P, et al. Science. 2021 Dec 17;374(6574):eabl9551. doi: 10.1126/science.abl9551. Epub 2021 Dec 17. Science. 2021. PMID: 34726481 Free PMC article.
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