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Page 1
Variation in predicted COVID-19 risk among lemurs and lorises.
Melin AD, Orkin JD, Janiak MC, Valenzuela A, Kuderna L, Marrone F 3rd, Ramangason H, Horvath JE, Roos C, Kitchener AC, Khor CC, Lim WK, Lee JGH, Tan P, Umapathy G, Raveendran M, Harris RA, Gut I, Gut M, Lizano E, Nadler T, Zinner D, Johnson SE, Jarvis ED, Fedrigo O, Wu D, Zhang G, Farh KK, Rogers J, Marques-Bonet T, Navarro A, Juan D, Arora PS, Higham JP. Melin AD, et al. Among authors: jarvis ed. bioRxiv [Preprint]. 2021 Feb 3:2021.02.03.429540. doi: 10.1101/2021.02.03.429540. bioRxiv. 2021. Update in: Am J Primatol. 2021 Jun;83(6):e23255. doi: 10.1002/ajp.23255 PMID: 33564767 Free PMC article. Updated. Preprint.
Variation in predicted COVID-19 risk among lemurs and lorises.
Melin AD, Orkin JD, Janiak MC, Valenzuela A, Kuderna L, Marrone F 3rd, Ramangason H, Horvath JE, Roos C, Kitchener AC, Khor CC, Lim WK, Lee JGH, Tan P, Umapathy G, Raveendran M, Alan Harris R, Gut I, Gut M, Lizano E, Nadler T, Zinner D, Le MD, Manu S, Rabarivola CJ, Zaramody A, Andriaholinirina N, Johnson SE, Jarvis ED, Fedrigo O, Wu D, Zhang G, Farh KK, Rogers J, Marques-Bonet T, Navarro A, Juan D, Arora PS, Higham JP. Melin AD, et al. Among authors: jarvis ed. Am J Primatol. 2021 Jun;83(6):e23255. doi: 10.1002/ajp.23255. Epub 2021 Apr 1. Am J Primatol. 2021. PMID: 33792947 Free PMC article.
A region of suppressed recombination misleads neoavian phylogenomics.
Mirarab S, Rivas-González I, Feng S, Stiller J, Fang Q, Mai U, Hickey G, Chen G, Brajuka N, Fedrigo O, Formenti G, Wolf JBW, Howe K, Antunes A, Schierup MH, Paten B, Jarvis ED, Zhang G, Braun EL. Mirarab S, et al. Among authors: jarvis ed. Proc Natl Acad Sci U S A. 2024 Apr 9;121(15):e2319506121. doi: 10.1073/pnas.2319506121. Epub 2024 Apr 1. Proc Natl Acad Sci U S A. 2024. PMID: 38557186 Free PMC article.
Avian genomes. A flock of genomes. Introduction.
Zhang G, Jarvis ED, Gilbert MT. Zhang G, et al. Among authors: jarvis ed. Science. 2014 Dec 12;346(6215):1308-9. doi: 10.1126/science.2014.346.6215.346_1308. Science. 2014. PMID: 25504710 Free PMC article. No abstract available.
Haplotype-resolved assembly of diploid genomes without parental data.
Cheng H, Jarvis ED, Fedrigo O, Koepfli KP, Urban L, Gemmell NJ, Li H. Cheng H, et al. Among authors: jarvis ed. Nat Biotechnol. 2022 Sep;40(9):1332-1335. doi: 10.1038/s41587-022-01261-x. Epub 2022 Mar 24. Nat Biotechnol. 2022. PMID: 35332338 Free PMC article.
Reference genomes for conservation.
Paez S, Kraus RHS, Shapiro B, Gilbert MTP, Jarvis ED; Vertebrate Genomes Project Conservation Group; Al-Ajli FO, Ceballos G, Crawford AJ, Fedrigo O, Johnson RN, Johnson WE, Marques-Bonet T, Morin PA, Mueller RC, Ryder OA, Teeling EC, Venkatesh B. Paez S, et al. Among authors: jarvis ed. Science. 2022 Jul 22;377(6604):364-366. doi: 10.1126/science.abm8127. Epub 2022 Jul 21. Science. 2022. PMID: 35862547
Scalable, accessible and reproducible reference genome assembly and evaluation in Galaxy.
Larivière D, Abueg L, Brajuka N, Gallardo-Alba C, Grüning B, Ko BJ, Ostrovsky A, Palmada-Flores M, Pickett BD, Rabbani K, Antunes A, Balacco JR, Chaisson MJP, Cheng H, Collins J, Couture M, Denisova A, Fedrigo O, Gallo GR, Giani AM, Gooder GM, Horan K, Jain N, Johnson C, Kim H, Lee C, Marques-Bonet T, O'Toole B, Rhie A, Secomandi S, Sozzoni M, Tilley T, Uliano-Silva M, van den Beek M, Williams RW, Waterhouse RM, Phillippy AM, Jarvis ED, Schatz MC, Nekrutenko A, Formenti G. Larivière D, et al. Among authors: jarvis ed. Nat Biotechnol. 2024 Mar;42(3):367-370. doi: 10.1038/s41587-023-02100-3. Nat Biotechnol. 2024. PMID: 38278971 Free PMC article. No abstract available.
Single-cell long-read sequencing-based mapping reveals specialized splicing patterns in developing and adult mouse and human brain.
Joglekar A, Hu W, Zhang B, Narykov O, Diekhans M, Marrocco J, Balacco J, Ndhlovu LC, Milner TA, Fedrigo O, Jarvis ED, Sheynkman G, Korkin D, Ross ME, Tilgner HU. Joglekar A, et al. Among authors: jarvis ed. Nat Neurosci. 2024 Jun;27(6):1051-1063. doi: 10.1038/s41593-024-01616-4. Epub 2024 Apr 9. Nat Neurosci. 2024. PMID: 38594596 Free PMC article.
241 results