Shi Y - Search Results

1

Mechanism and consequences of herpes simplex virus 1-mediated regulation of host mRNA alternative polyadenylation.

Wang X, Liu L, Whisnant AW, Hennig T, Djakovic L, Haque N, Bach C, Sandri-Goldin RM, Erhard F, Friedel CC, Dölken L, Shi Y. Wang X, et al. Among authors: shi y. PLoS Genet. 2021 Mar 8;17(3):e1009263. doi: 10.1371/journal.pgen.1009263. eCollection 2021 Mar. PLoS Genet. 2021. PMID: 33684133 Free PMC article.

2

Complex and dynamic landscape of RNA polyadenylation revealed by PAS-Seq.

Shepard PJ, Choi EA, Lu J, Flanagan LA, Hertel KJ, Shi Y. Shepard PJ, et al. Among authors: shi y. RNA. 2011 Apr;17(4):761-72. doi: 10.1261/rna.2581711. Epub 2011 Feb 22. RNA. 2011. PMID: 21343387 Free PMC article.

3

Alternative polyadenylation: new insights from global analyses.

Shi Y. Shi Y. RNA. 2012 Dec;18(12):2105-17. doi: 10.1261/rna.035899.112. Epub 2012 Oct 24. RNA. 2012. PMID: 23097429 Free PMC article. Review.

4

Transcriptome-wide analyses of CstF64-RNA interactions in global regulation of mRNA alternative polyadenylation.

Yao C, Biesinger J, Wan J, Weng L, Xing Y, Xie X, Shi Y. Yao C, et al. Among authors: shi y. Proc Natl Acad Sci U S A. 2012 Nov 13;109(46):18773-8. doi: 10.1073/pnas.1211101109. Epub 2012 Oct 29. Proc Natl Acad Sci U S A. 2012. PMID: 23112178 Free PMC article.

5

Global and quantitative profiling of polyadenylated RNAs using PAS-seq.

Yao C, Shi Y. Yao C, et al. Among authors: shi y. Methods Mol Biol. 2014;1125:179-85. doi: 10.1007/978-1-62703-971-0_16. Methods Mol Biol. 2014. PMID: 24590790 Free PMC article.

6

The polyadenylation code: a unified model for the regulation of mRNA alternative polyadenylation.

Davis R, Shi Y. Davis R, et al. Among authors: shi y. J Zhejiang Univ Sci B. 2014 May;15(5):429-37. doi: 10.1631/jzus.B1400076. J Zhejiang Univ Sci B. 2014. PMID: 24793760 Free PMC article. Review.

7

The end of the message: multiple protein-RNA interactions define the mRNA polyadenylation site.

Shi Y, Manley JL. Shi Y, et al. Genes Dev. 2015 May 1;29(9):889-97. doi: 10.1101/gad.261974.115. Genes Dev. 2015. PMID: 25934501 Free PMC article. Review.

8

Poly(A) code analyses reveal key determinants for tissue-specific mRNA alternative polyadenylation.

Weng L, Li Y, Xie X, Shi Y. Weng L, et al. Among authors: shi y. RNA. 2016 Jun;22(6):813-21. doi: 10.1261/rna.055681.115. Epub 2016 Apr 19. RNA. 2016. PMID: 27095026 Free PMC article.

9

Purification of mRNA Processing Complexes Using an RNA Affinity Approach.

Wang X, Shi Y. Wang X, et al. Among authors: shi y. Methods Mol Biol. 2017;1648:53-63. doi: 10.1007/978-1-4939-7204-3_5. Methods Mol Biol. 2017. PMID: 28766289 Free article.

10

Molecular Mechanisms for CFIm-Mediated Regulation of mRNA Alternative Polyadenylation.

Zhu Y, Wang X, Forouzmand E, Jeong J, Qiao F, Sowd GA, Engelman AN, Xie X, Hertel KJ, Shi Y. Zhu Y, et al. Among authors: shi y. Mol Cell. 2018 Jan 4;69(1):62-74.e4. doi: 10.1016/j.molcel.2017.11.031. Epub 2017 Dec 21. Mol Cell. 2018. PMID: 29276085 Free PMC article.

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