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The contributions from the progenitor genomes of the mesopolyploid Brassiceae are evolutionarily distinct but functionally compatible.
Hao Y, Mabry ME, Edger PP, Freeling M, Zheng C, Jin L, VanBuren R, Colle M, An H, Abrahams RS, Washburn JD, Qi X, Barry K, Daum C, Shu S, Schmutz J, Sankoff D, Barker MS, Lyons E, Pires JC, Conant GC. Hao Y, et al. Among authors: daum c. Genome Res. 2021 May;31(5):799-810. doi: 10.1101/gr.270033.120. Epub 2021 Apr 16. Genome Res. 2021. PMID: 33863805 Free PMC article.
Comparative Genomics of Early-Diverging Mushroom-Forming Fungi Provides Insights into the Origins of Lignocellulose Decay Capabilities.
Nagy LG, Riley R, Tritt A, Adam C, Daum C, Floudas D, Sun H, Yadav JS, Pangilinan J, Larsson KH, Matsuura K, Barry K, Labutti K, Kuo R, Ohm RA, Bhattacharya SS, Shirouzu T, Yoshinaga Y, Martin FM, Grigoriev IV, Hibbett DS. Nagy LG, et al. Among authors: daum c. Mol Biol Evol. 2016 Apr;33(4):959-70. doi: 10.1093/molbev/msv337. Epub 2015 Dec 10. Mol Biol Evol. 2016. PMID: 26659563 Free article.
Extensive Genetic Diversity is Present within North American Switchgrass Germplasm.
Evans J, Sanciangco MD, Lau KH, Crisovan E, Barry K, Daum C, Hundley H, Jenkins J, Kennedy M, Kunde-Ramamoorthy G, Vaillancourt B, Acharya A, Schmutz J, Saha M, Kaeppler SM, Brummer EC, Casler MD, Buell CR. Evans J, et al. Among authors: daum c. Plant Genome. 2018 Mar;11(1). doi: 10.3835/plantgenome2017.06.0055. Plant Genome. 2018. PMID: 29505643 Free article.
The genomic landscape of molecular responses to natural drought stress in Panicum hallii.
Lovell JT, Jenkins J, Lowry DB, Mamidi S, Sreedasyam A, Weng X, Barry K, Bonnette J, Campitelli B, Daum C, Gordon SP, Gould BA, Khasanova A, Lipzen A, MacQueen A, Palacio-Mejía JD, Plott C, Shakirov EV, Shu S, Yoshinaga Y, Zane M, Kudrna D, Talag JD, Rokhsar D, Grimwood J, Schmutz J, Juenger TE. Lovell JT, et al. Among authors: daum c. Nat Commun. 2018 Dec 6;9(1):5213. doi: 10.1038/s41467-018-07669-x. Nat Commun. 2018. PMID: 30523281 Free PMC article.
A new reference genome for Sorghum bicolor reveals high levels of sequence similarity between sweet and grain genotypes: implications for the genetics of sugar metabolism.
Cooper EA, Brenton ZW, Flinn BS, Jenkins J, Shu S, Flowers D, Luo F, Wang Y, Xia P, Barry K, Daum C, Lipzen A, Yoshinaga Y, Schmutz J, Saski C, Vermerris W, Kresovich S. Cooper EA, et al. Among authors: daum c. BMC Genomics. 2019 May 27;20(1):420. doi: 10.1186/s12864-019-5734-x. BMC Genomics. 2019. PMID: 31133004 Free PMC article.
Construction and comparison of three reference-quality genome assemblies for soybean.
Valliyodan B, Cannon SB, Bayer PE, Shu S, Brown AV, Ren L, Jenkins J, Chung CY, Chan TF, Daum CG, Plott C, Hastie A, Baruch K, Barry KW, Huang W, Patil G, Varshney RK, Hu H, Batley J, Yuan Y, Song Q, Stupar RM, Goodstein DM, Stacey G, Lam HM, Jackson SA, Schmutz J, Grimwood J, Edwards D, Nguyen HT. Valliyodan B, et al. Among authors: daum cg. Plant J. 2019 Dec;100(5):1066-1082. doi: 10.1111/tpj.14500. Epub 2019 Oct 28. Plant J. 2019. PMID: 31433882 Free article.
Variation and Inheritance of Small RNAs in Maize Inbreds and F1 Hybrids.
Crisp PA, Hammond R, Zhou P, Vaillancourt B, Lipzen A, Daum C, Barry K, de Leon N, Buell CR, Kaeppler SM, Meyers BC, Hirsch CN, Springer NM. Crisp PA, et al. Among authors: daum c. Plant Physiol. 2020 Jan;182(1):318-331. doi: 10.1104/pp.19.00817. Epub 2019 Oct 1. Plant Physiol. 2020. PMID: 31575624 Free PMC article.
PEATmoss (Physcomitrella Expression Atlas Tool): a unified gene expression atlas for the model plant Physcomitrella patens.
Fernandez-Pozo N, Haas FB, Meyberg R, Ullrich KK, Hiss M, Perroud PF, Hanke S, Kratz V, Powell AF, Vesty EF, Daum CG, Zane M, Lipzen A, Sreedasyam A, Grimwood J, Coates JC, Barry K, Schmutz J, Mueller LA, Rensing SA. Fernandez-Pozo N, et al. Among authors: daum cg. Plant J. 2020 Apr;102(1):165-177. doi: 10.1111/tpj.14607. Epub 2020 Jan 11. Plant J. 2020. PMID: 31714620 Free article.
198 results