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NASA GeneLab RNA-seq consensus pipeline: standardized processing of short-read RNA-seq data.
Overbey EG, Saravia-Butler AM, Zhang Z, Rathi KS, Fogle H, da Silveira WA, Barker RJ, Bass JJ, Beheshti A, Berrios DC, Blaber EA, Cekanaviciute E, Costa HA, Davin LB, Fisch KM, Gebre SG, Geniza M, Gilbert R, Gilroy S, Hardiman G, Herranz R, Kidane YH, Kruse CPS, Lee MD, Liefeld T, Lewis NG, McDonald JT, Meller R, Mishra T, Perera IY, Ray S, Reinsch SS, Rosenthal SB, Strong M, Szewczyk NJ, Tahimic CGT, Taylor DM, Vandenbrink JP, Villacampa A, Weging S, Wolverton C, Wyatt SE, Zea L, Costes SV, Galazka JM. Overbey EG, et al. Among authors: geniza m. iScience. 2021 Mar 26;24(4):102361. doi: 10.1016/j.isci.2021.102361. eCollection 2021 Apr 23. iScience. 2021. PMID: 33870146 Free PMC article.
De novo transcriptome assembly and analyses of gene expression during photomorphogenesis in diploid wheat Triticum monococcum.
Fox SE, Geniza M, Hanumappa M, Naithani S, Sullivan C, Preece J, Tiwari VK, Elser J, Leonard JM, Sage A, Gresham C, Kerhornou A, Bolser D, McCarthy F, Kersey P, Lazo GR, Jaiswal P. Fox SE, et al. Among authors: geniza m. PLoS One. 2014 May 12;9(5):e96855. doi: 10.1371/journal.pone.0096855. eCollection 2014. PLoS One. 2014. PMID: 24821410 Free PMC article.
Gramene 2018: unifying comparative genomics and pathway resources for plant research.
Tello-Ruiz MK, Naithani S, Stein JC, Gupta P, Campbell M, Olson A, Wei S, Preece J, Geniza MJ, Jiao Y, Lee YK, Wang B, Mulvaney J, Chougule K, Elser J, Al-Bader N, Kumari S, Thomason J, Kumar V, Bolser DM, Naamati G, Tapanari E, Fonseca N, Huerta L, Iqbal H, Keays M, Munoz-Pomer Fuentes A, Tang A, Fabregat A, D'Eustachio P, Weiser J, Stein LD, Petryszak R, Papatheodorou I, Kersey PJ, Lockhart P, Taylor C, Jaiswal P, Ware D. Tello-Ruiz MK, et al. Among authors: geniza mj. Nucleic Acids Res. 2018 Jan 4;46(D1):D1181-D1189. doi: 10.1093/nar/gkx1111. Nucleic Acids Res. 2018. PMID: 29165610 Free PMC article.
Expression Atlas: gene and protein expression across multiple studies and organisms.
Papatheodorou I, Fonseca NA, Keays M, Tang YA, Barrera E, Bazant W, Burke M, Füllgrabe A, Fuentes AM, George N, Huerta L, Koskinen S, Mohammed S, Geniza M, Preece J, Jaiswal P, Jarnuczak AF, Huber W, Stegle O, Vizcaino JA, Brazma A, Petryszak R. Papatheodorou I, et al. Among authors: geniza m. Nucleic Acids Res. 2018 Jan 4;46(D1):D246-D251. doi: 10.1093/nar/gkx1158. Nucleic Acids Res. 2018. PMID: 29165655 Free PMC article.
Quantitative Trait Loci Associated with the Tocochromanol (Vitamin E) Pathway in Barley.
Graebner RC, Wise M, Cuesta-Marcos A, Geniza M, Blake T, Blake VC, Butler J, Chao S, Hole DJ, Horsley R, Jaiswal P, Obert D, Smith KP, Ullrich S, Hayes PM. Graebner RC, et al. Among authors: geniza m. PLoS One. 2015 Jul 24;10(7):e0133767. doi: 10.1371/journal.pone.0133767. eCollection 2015. PLoS One. 2015. PMID: 26208213 Free PMC article.
Evaluation of a Wastewater-Based Epidemiological Approach to Estimate the Prevalence of SARS-CoV-2 Infections and the Detection of Viral Variants in Disparate Oregon Communities at City and Neighborhood Scales.
Layton BA, Kaya D, Kelly C, Williamson KJ, Alegre D, Bachhuber SM, Banwarth PG, Bethel JW, Carter K, Dalziel BD, Dasenko M, Geniza M, George A, Girard AM, Haggerty R, Higley KA, Hynes DM, Lubchenco J, McLaughlin KR, Nieto FJ, Noakes A, Peterson M, Piemonti AD, Sanders JL, Tyler BM, Radniecki TS. Layton BA, et al. Among authors: geniza m. Environ Health Perspect. 2022 Jun;130(6):67010. doi: 10.1289/EHP10289. Epub 2022 Jun 29. Environ Health Perspect. 2022. PMID: 35767012 Free PMC article.
15 results