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NSAID use and clinical outcomes in COVID-19 patients: A 38-center retrospective cohort study.
Reese JT, Coleman B, Chan L, Blau H, Callahan TJ, Cappelletti L, Fontana T, Bradwell KR, Harris NL, Casiraghi E, Valentini G, Karlebach G, Deer R, McMurry JA, Haendel MA, Chute CG, Pfaff E, Moffitt R, Spratt H, Singh J, Mungall CJ, Williams AE, Robinson PN. Reese JT, et al. Among authors: pfaff e. medRxiv [Preprint]. 2021 Dec 22:2021.04.13.21255438. doi: 10.1101/2021.04.13.21255438. medRxiv. 2021. Update in: Virol J. 2022 May 15;19(1):84. doi: 10.1186/s12985-022-01813-2 PMID: 33907758 Free PMC article. Updated. Preprint.
Clinical Data: Sources and Types, Regulatory Constraints, Applications.
Ahalt SC, Chute CG, Fecho K, Glusman G, Hadlock J, Taylor CO, Pfaff ER, Robinson PN, Solbrig H, Ta C, Tatonetti N, Weng C; Biomedical Data Translator Consortium. Ahalt SC, et al. Clin Transl Sci. 2019 Jul;12(4):329-333. doi: 10.1111/cts.12638. Epub 2019 May 9. Clin Transl Sci. 2019. PMID: 31074176 Free PMC article. No abstract available.
Semantic integration of clinical laboratory tests from electronic health records for deep phenotyping and biomarker discovery.
Zhang XA, Yates A, Vasilevsky N, Gourdine JP, Callahan TJ, Carmody LC, Danis D, Joachimiak MP, Ravanmehr V, Pfaff ER, Champion J, Robasky K, Xu H, Fecho K, Walton NA, Zhu RL, Ramsdill J, Mungall CJ, Köhler S, Haendel MA, McDonald CJ, Vreeman DJ, Peden DB, Bennett TD, Feinstein JA, Martin B, Stefanski AL, Hunter LE, Chute CG, Robinson PN. Zhang XA, et al. Among authors: pfaff er. NPJ Digit Med. 2019;2:32. doi: 10.1038/s41746-019-0110-4. Epub 2019 May 2. NPJ Digit Med. 2019. PMID: 31119199 Free PMC article.
Sex, obesity, diabetes, and exposure to particulate matter among patients with severe asthma: Scientific insights from a comparative analysis of open clinical data sources during a five-day hackathon.
Fecho K, Ahalt SC, Arunachalam S, Champion J, Chute CG, Davis S, Gersing K, Glusman G, Hadlock J, Lee J, Pfaff E, Robinson M, Sid E, Ta C, Xu H, Zhu R, Zhu Q, Peden DB; Biomedical Data Translator Consortium. Fecho K, et al. Among authors: pfaff e. J Biomed Inform. 2019 Dec;100:103325. doi: 10.1016/j.jbi.2019.103325. Epub 2019 Oct 30. J Biomed Inform. 2019. PMID: 31676459 Free PMC article.
The National COVID Cohort Collaborative (N3C): Rationale, design, infrastructure, and deployment.
Haendel MA, Chute CG, Bennett TD, Eichmann DA, Guinney J, Kibbe WA, Payne PRO, Pfaff ER, Robinson PN, Saltz JH, Spratt H, Suver C, Wilbanks J, Wilcox AB, Williams AE, Wu C, Blacketer C, Bradford RL, Cimino JJ, Clark M, Colmenares EW, Francis PA, Gabriel D, Graves A, Hemadri R, Hong SS, Hripscak G, Jiao D, Klann JG, Kostka K, Lee AM, Lehmann HP, Lingrey L, Miller RT, Morris M, Murphy SN, Natarajan K, Palchuk MB, Sheikh U, Solbrig H, Visweswaran S, Walden A, Walters KM, Weber GM, Zhang XT, Zhu RL, Amor B, Girvin AT, Manna A, Qureshi N, Kurilla MG, Michael SG, Portilla LM, Rutter JL, Austin CP, Gersing KR; N3C Consortium. Haendel MA, et al. Among authors: pfaff er. J Am Med Inform Assoc. 2021 Mar 1;28(3):427-443. doi: 10.1093/jamia/ocaa196. J Am Med Inform Assoc. 2021. PMID: 32805036 Free PMC article.
The National COVID Cohort Collaborative: Clinical Characterization and Early Severity Prediction.
Bennett TD, Moffitt RA, Hajagos JG, Amor B, Anand A, Bissell MM, Bradwell KR, Bremer C, Byrd JB, Denham A, DeWitt PE, Gabriel D, Garibaldi BT, Girvin AT, Guinney J, Hill EL, Hong SS, Jimenez H, Kavuluru R, Kostka K, Lehmann HP, Levitt E, Mallipattu SK, Manna A, McMurry JA, Morris M, Muschelli J, Neumann AJ, Palchuk MB, Pfaff ER, Qian Z, Qureshi N, Russell S, Spratt H, Walden A, Williams AE, Wooldridge JT, Yoo YJ, Zhang XT, Zhu RL, Austin CP, Saltz JH, Gersing KR, Haendel MA, Chute CG; N3C Consortium. Bennett TD, et al. Among authors: pfaff er. medRxiv [Preprint]. 2021 Jan 23:2021.01.12.21249511. doi: 10.1101/2021.01.12.21249511. medRxiv. 2021. Update in: JAMA Netw Open. 2021 Jul 1;4(7):e2116901. doi: 10.1001/jamanetworkopen.2021.16901 PMID: 33469592 Free PMC article. Updated. Preprint.
Challenges in defining Long COVID: Striking differences across literature, Electronic Health Records, and patient-reported information.
Rando HM, Bennett TD, Byrd JB, Bramante C, Callahan TJ, Chute CG, Davis HE, Deer R, Gagnier J, Koraishy FM, Liu F, McMurry JA, Moffitt RA, Pfaff ER, Reese JT, Relevo R, Robinson PN, Saltz JH, Solomonides A, Sule A, Topaloglu U, Haendel MA. Rando HM, et al. Among authors: pfaff er. medRxiv [Preprint]. 2021 Mar 26:2021.03.20.21253896. doi: 10.1101/2021.03.20.21253896. medRxiv. 2021. PMID: 33791733 Free PMC article. Preprint.
Clinical Characterization and Prediction of Clinical Severity of SARS-CoV-2 Infection Among US Adults Using Data From the US National COVID Cohort Collaborative.
Bennett TD, Moffitt RA, Hajagos JG, Amor B, Anand A, Bissell MM, Bradwell KR, Bremer C, Byrd JB, Denham A, DeWitt PE, Gabriel D, Garibaldi BT, Girvin AT, Guinney J, Hill EL, Hong SS, Jimenez H, Kavuluru R, Kostka K, Lehmann HP, Levitt E, Mallipattu SK, Manna A, McMurry JA, Morris M, Muschelli J, Neumann AJ, Palchuk MB, Pfaff ER, Qian Z, Qureshi N, Russell S, Spratt H, Walden A, Williams AE, Wooldridge JT, Yoo YJ, Zhang XT, Zhu RL, Austin CP, Saltz JH, Gersing KR, Haendel MA, Chute CG; National COVID Cohort Collaborative (N3C) Consortium. Bennett TD, et al. Among authors: pfaff er. JAMA Netw Open. 2021 Jul 1;4(7):e2116901. doi: 10.1001/jamanetworkopen.2021.16901. JAMA Netw Open. 2021. PMID: 34255046 Free PMC article.
Children with SARS-CoV-2 in the National COVID Cohort Collaborative (N3C).
Martin B, DeWitt PE, Russell S, Anand A, Bradwell KR, Bremer C, Gabriel D, Girvin AT, Hajagos JG, McMurry JA, Neumann AJ, Pfaff ER, Walden A, Wooldridge JT, Yoo YJ, Saltz J, Gersing KR, Chute CG, Haendel MA, Moffitt R, Bennett TD. Martin B, et al. Among authors: pfaff er. medRxiv [Preprint]. 2021 Jul 23:2021.07.19.21260767. doi: 10.1101/2021.07.19.21260767. medRxiv. 2021. Update in: JAMA Netw Open. 2022 Feb 1;5(2):e2143151. doi: 10.1001/jamanetworkopen.2021.43151 PMID: 34341796 Free PMC article. Updated. Preprint.
293 results