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Page 1
Diversity in immunogenomics: the value and the challenge.
Peng K, Safonova Y, Shugay M, Popejoy AB, Rodriguez OL, Breden F, Brodin P, Burkhardt AM, Bustamante C, Cao-Lormeau VM, Corcoran MM, Duffy D, Fuentes-Guajardo M, Fujita R, Greiff V, Jönsson VD, Liu X, Quintana-Murci L, Rossetti M, Xie J, Yaari G, Zhang W, Abedalthagafi MS, Adekoya KO, Ahmed RA, Chang WC, Gray C, Nakamura Y, Lees WD, Khatri P, Alachkar H, Scheepers C, Watson CT, Karlsson Hedestam GB, Mangul S. Peng K, et al. Among authors: jonsson vd. Nat Methods. 2021 Jun;18(6):588-591. doi: 10.1038/s41592-021-01169-5. Nat Methods. 2021. PMID: 34002093 Free PMC article.
Advancing T cell-based cancer therapy with single-cell technologies.
Bucktrout SL, Banovich NE, Butterfield LH, Cimen-Bozkus C, Giles JR, Good Z, Goodman D, Jonsson VD, Lareau C, Marson A, Maurer DM, Munson PV, Stubbington M, Taylor S, Cutchin A. Bucktrout SL, et al. Among authors: jonsson vd. Nat Med. 2022 Sep;28(9):1761-1764. doi: 10.1038/s41591-022-01986-x. Nat Med. 2022. PMID: 36127419 No abstract available.
Oncomir miR-125b regulates hematopoiesis by targeting the gene Lin28A.
Chaudhuri AA, So AY, Mehta A, Minisandram A, Sinha N, Jonsson VD, Rao DS, O'Connell RM, Baltimore D. Chaudhuri AA, et al. Among authors: jonsson vd. Proc Natl Acad Sci U S A. 2012 Mar 13;109(11):4233-8. doi: 10.1073/pnas.1200677109. Epub 2012 Feb 24. Proc Natl Acad Sci U S A. 2012. PMID: 22366319 Free PMC article.
A rare HSC-derived megakaryocyte progenitor accumulates via enhanced survival and contributes to exacerbated thrombopoiesis upon aging.
Manso BA, Medina P, Smith-Berdan S, Baena ARY, Bachinsky E, Mok L, Deguzman A, Avila SB, Chattopadhyaya S, Rommel MGE, Jönsson VD, Forsberg EC. Manso BA, et al. Among authors: jonsson vd. bioRxiv [Preprint]. 2024 Nov 5:2024.11.04.621964. doi: 10.1101/2024.11.04.621964. bioRxiv. 2024. PMID: 39574585 Free PMC article. Preprint.
Ten challenges and opportunities in computational immuno-oncology.
Bao R, Hutson A, Madabhushi A, Jonsson VD, Rosario SR, Barnholtz-Sloan JS, Fertig EJ, Marathe H, Harris L, Altreuter J, Chen Q, Dignam J, Gentles AJ, Gonzalez-Kozlova E, Gnjatic S, Kim E, Long M, Morgan M, Ruppin E, Valen DV, Zhang H, Vokes N, Meerzaman D, Liu S, Van Allen EM, Xing Y. Bao R, et al. Among authors: jonsson vd. J Immunother Cancer. 2024 Oct 26;12(10):e009721. doi: 10.1136/jitc-2024-009721. J Immunother Cancer. 2024. PMID: 39461879 Free PMC article. Review.
SIMS: A deep-learning label transfer tool for single-cell RNA sequencing analysis.
Gonzalez-Ferrer J, Lehrer J, O'Farrell A, Paten B, Teodorescu M, Haussler D, Jonsson VD, Mostajo-Radji MA. Gonzalez-Ferrer J, et al. Among authors: jonsson vd. Cell Genom. 2024 Jun 12;4(6):100581. doi: 10.1016/j.xgen.2024.100581. Epub 2024 May 31. Cell Genom. 2024. PMID: 38823397 Free PMC article.
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