Robinson MD - Search Results

1

Synaptic FUS accumulation triggers early misregulation of synaptic RNAs in a mouse model of ALS.

Sahadevan S, Hembach KM, Tantardini E, Pérez-Berlanga M, Hruska-Plochan M, Megat S, Weber J, Schwarz P, Dupuis L, Robinson MD, De Rossi P, Polymenidou M. Sahadevan S, et al. Among authors: robinson md. Nat Commun. 2021 May 21;12(1):3027. doi: 10.1038/s41467-021-23188-8. Nat Commun. 2021. PMID: 34021139 Free PMC article.

2

ARMOR: An Automated Reproducible MOdular Workflow for Preprocessing and Differential Analysis of RNA-seq Data.

Orjuela S, Huang R, Hembach KM, Robinson MD, Soneson C. Orjuela S, et al. Among authors: robinson md. G3 (Bethesda). 2019 Jul 9;9(7):2089-2096. doi: 10.1534/g3.119.400185. Print 2019 Jul 1. G3 (Bethesda). 2019. PMID: 31088905 Free PMC article.

3

A comprehensive examination of Nanopore native RNA sequencing for characterization of complex transcriptomes.

Soneson C, Yao Y, Bratus-Neuenschwander A, Patrignani A, Robinson MD, Hussain S. Soneson C, et al. Among authors: robinson md. Nat Commun. 2019 Jul 31;10(1):3359. doi: 10.1038/s41467-019-11272-z. Nat Commun. 2019. PMID: 31366910 Free PMC article.

4

muscat detects subpopulation-specific state transitions from multi-sample multi-condition single-cell transcriptomics data.

Crowell HL, Soneson C, Germain PL, Calini D, Collin L, Raposo C, Malhotra D, Robinson MD. Crowell HL, et al. Among authors: robinson md. Nat Commun. 2020 Nov 30;11(1):6077. doi: 10.1038/s41467-020-19894-4. Nat Commun. 2020. PMID: 33257685 Free PMC article.

5

Methylome sequencing in triple-negative breast cancer reveals distinct methylation clusters with prognostic value.

Stirzaker C, Zotenko E, Song JZ, Qu W, Nair SS, Locke WJ, Stone A, Armstong NJ, Robinson MD, Dobrovic A, Avery-Kiejda KA, Peters KM, French JD, Stein S, Korbie DJ, Trau M, Forbes JF, Scott RJ, Brown MA, Francis GD, Clark SJ. Stirzaker C, et al. Among authors: robinson md. Nat Commun. 2015 Feb 2;6:5899. doi: 10.1038/ncomms6899. Nat Commun. 2015. PMID: 25641231 Free article.

6

iCOBRA: open, reproducible, standardized and live method benchmarking.

Soneson C, Robinson MD. Soneson C, et al. Among authors: robinson md. Nat Methods. 2016 Apr;13(4):283. doi: 10.1038/nmeth.3805. Nat Methods. 2016. PMID: 27027585 Free article. No abstract available.

7

T-cell acute leukaemia exhibits dynamic interactions with bone marrow microenvironments.

Hawkins ED, Duarte D, Akinduro O, Khorshed RA, Passaro D, Nowicka M, Straszkowski L, Scott MK, Rothery S, Ruivo N, Foster K, Waibel M, Johnstone RW, Harrison SJ, Westerman DA, Quach H, Gribben J, Robinson MD, Purton LE, Bonnet D, Lo Celso C. Hawkins ED, et al. Among authors: robinson md. Nature. 2016 Oct 27;538(7626):518-522. doi: 10.1038/nature19801. Epub 2016 Oct 17. Nature. 2016. PMID: 27750279 Free PMC article.

8

Bias, robustness and scalability in single-cell differential expression analysis.

Soneson C, Robinson MD. Soneson C, et al. Among authors: robinson md. Nat Methods. 2018 Apr;15(4):255-261. doi: 10.1038/nmeth.4612. Epub 2018 Feb 26. Nat Methods. 2018. PMID: 29481549

9

Treatment of a metabolic liver disease by in vivo genome base editing in adult mice.

Villiger L, Grisch-Chan HM, Lindsay H, Ringnalda F, Pogliano CB, Allegri G, Fingerhut R, Häberle J, Matos J, Robinson MD, Thöny B, Schwank G. Villiger L, et al. Among authors: robinson md. Nat Med. 2018 Oct;24(10):1519-1525. doi: 10.1038/s41591-018-0209-1. Epub 2018 Oct 8. Nat Med. 2018. PMID: 30297904 Free article.

10

Origin and differentiation trajectories of fibroblastic reticular cells in the splenic white pulp.

Cheng HW, Onder L, Novkovic M, Soneson C, Lütge M, Pikor N, Scandella E, Robinson MD, Miyazaki JI, Tersteegen A, Sorg U, Pfeffer K, Rülicke T, Hehlgans T, Ludewig B. Cheng HW, et al. Among authors: robinson md. Nat Commun. 2019 Apr 15;10(1):1739. doi: 10.1038/s41467-019-09728-3. Nat Commun. 2019. PMID: 30988302 Free PMC article.

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