LaFramboise T - Search Results

1

Exonic variants undergoing allele-specific selection in cancers.

Li Q, Zeng Y, Wang J, Fang H, Guo J, Yu L, Zhong T, Xu C, Freedman M, LaFramboise T. Li Q, et al. Among authors: laframboise t. BMC Med Genomics. 2021 May 31;14(1):142. doi: 10.1186/s12920-021-00984-1. BMC Med Genomics. 2021. PMID: 34059054 Free PMC article.

2

Toward accurate high-throughput SNP genotyping in the presence of inherited copy number variation.

Macconaill LE, Aldred MA, Lu X, Laframboise T. Macconaill LE, et al. Among authors: laframboise t. BMC Genomics. 2007 Jul 3;8:211. doi: 10.1186/1471-2164-8-211. BMC Genomics. 2007. PMID: 17608949 Free PMC article.

3

Power to detect selective allelic amplification in genome-wide scans of tumor data.

Dewal N, Freedman ML, LaFramboise T, Pe'er I. Dewal N, et al. Among authors: laframboise t. Bioinformatics. 2010 Feb 15;26(4):518-28. doi: 10.1093/bioinformatics/btp694. Epub 2009 Dec 23. Bioinformatics. 2010. PMID: 20031965 Free PMC article.

4

Allelic selection of amplicons in glioblastoma revealed by combining somatic and germline analysis.

LaFramboise T, Dewal N, Wilkins K, Pe'er I, Freedman ML. LaFramboise T, et al. PLoS Genet. 2010 Sep 2;6(9):e1001086. doi: 10.1371/journal.pgen.1001086. PLoS Genet. 2010. PMID: 20824129 Free PMC article.

5

Calling amplified haplotypes in next generation tumor sequence data.

Dewal N, Hu Y, Freedman ML, Laframboise T, Pe'er I. Dewal N, et al. Among authors: laframboise t. Genome Res. 2012 Feb;22(2):362-74. doi: 10.1101/gr.122564.111. Epub 2011 Nov 16. Genome Res. 2012. PMID: 22090379 Free PMC article.

6

Integrative eQTL-based analyses reveal the biology of breast cancer risk loci.

Li Q, Seo JH, Stranger B, McKenna A, Pe'er I, Laframboise T, Brown M, Tyekucheva S, Freedman ML. Li Q, et al. Among authors: laframboise t. Cell. 2013 Jan 31;152(3):633-41. doi: 10.1016/j.cell.2012.12.034. Cell. 2013. PMID: 23374354 Free PMC article. Review.

7

DB2: a probabilistic approach for accurate detection of tandem duplication breakpoints using paired-end reads.

Yavaş G, Koyutürk M, Gould MP, McMahon S, LaFramboise T. Yavaş G, et al. Among authors: laframboise t. BMC Genomics. 2014 Mar 5;15(1):175. doi: 10.1186/1471-2164-15-175. BMC Genomics. 2014. PMID: 24597945 Free PMC article.

8

Mitochondrial genomics in the cancer cell line encyclopedia and a scoring method to effectively pair cell lines for cytoplasmic hybridization.

Grandhi S, Gould L, Wang J, Grandhi A, LaFramboise T. Grandhi S, et al. Among authors: laframboise t. Mitochondrion. 2019 May;46:256-261. doi: 10.1016/j.mito.2018.07.005. Epub 2018 Jul 31. Mitochondrion. 2019. PMID: 30075297

9

CytoConverter: a web-based tool to convert karyotypes to genomic coordinates.

Wang J, LaFramboise T. Wang J, et al. Among authors: laframboise t. BMC Bioinformatics. 2019 Sep 11;20(1):467. doi: 10.1186/s12859-019-3062-4. BMC Bioinformatics. 2019. PMID: 31510921 Free PMC article.

10

Rare germline variant contributions to myeloid malignancy susceptibility.

Li ST, Wang J, Wei R, Shi R, Adema V, Nagata Y, Kerr CM, Kuzmanovic T, Przychodzen B, Sole F, Maciejewski JP, LaFramboise T. Li ST, et al. Among authors: laframboise t. Leukemia. 2020 Jun;34(6):1675-1678. doi: 10.1038/s41375-019-0701-8. Epub 2020 Jan 7. Leukemia. 2020. PMID: 31911633 Free PMC article. No abstract available.

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