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Candidate probiotic Lactiplantibacillus plantarum HNU082 rapidly and convergently evolves within human, mice, and zebrafish gut but differentially influences the resident microbiome.
Huang S, Jiang S, Huo D, Allaband C, Estaki M, Cantu V, Belda-Ferre P, Vázquez-Baeza Y, Zhu Q, Ma C, Li C, Zarrinpar A, Liu YY, Knight R, Zhang J. Huang S, et al. Among authors: liu yy. Microbiome. 2021 Jun 30;9(1):151. doi: 10.1186/s40168-021-01102-0. Microbiome. 2021. PMID: 34193290 Free PMC article.
Deciphering functional redundancy in the human microbiome.
Tian L, Wang XW, Wu AK, Fan Y, Friedman J, Dahlin A, Waldor MK, Weinstock GM, Weiss ST, Liu YY. Tian L, et al. Among authors: liu yy. Nat Commun. 2020 Dec 4;11(1):6217. doi: 10.1038/s41467-020-19940-1. Nat Commun. 2020. PMID: 33277504 Free PMC article.
Challenges in benchmarking metagenomic profilers.
Sun Z, Huang S, Zhang M, Zhu Q, Haiminen N, Carrieri AP, Vázquez-Baeza Y, Parida L, Kim HC, Knight R, Liu YY. Sun Z, et al. Among authors: liu yy. Nat Methods. 2021 Jun;18(6):618-626. doi: 10.1038/s41592-021-01141-3. Epub 2021 May 13. Nat Methods. 2021. PMID: 33986544 Free PMC article.
Rejuvenating the human gut microbiome.
Ke S, Weiss ST, Liu YY. Ke S, et al. Among authors: liu yy. Trends Mol Med. 2022 Aug;28(8):619-630. doi: 10.1016/j.molmed.2022.05.005. Epub 2022 Jun 30. Trends Mol Med. 2022. PMID: 35781423 Free PMC article. Review.
Controlling the human microbiome.
Liu YY. Liu YY. Cell Syst. 2023 Feb 15;14(2):135-159. doi: 10.1016/j.cels.2022.12.010. Cell Syst. 2023. PMID: 36796332 Free PMC article. Review.
Universality of human microbial dynamics.
Bashan A, Gibson TE, Friedman J, Carey VJ, Weiss ST, Hohmann EL, Liu YY. Bashan A, et al. Among authors: liu yy. Nature. 2016 Jun 9;534(7606):259-62. doi: 10.1038/nature18301. Nature. 2016. PMID: 27279224 Free PMC article.
Gut Microbiota Predicts Healthy Late-Life Aging in Male Mice.
Ke S, Mitchell SJ, MacArthur MR, Kane AE, Sinclair DA, Venable EM, Chadaideh KS, Carmody RN, Grodstein F, Mitchell JR, Liu Y. Ke S, et al. Nutrients. 2021 Sep 21;13(9):3290. doi: 10.3390/nu13093290. Nutrients. 2021. PMID: 34579167 Free PMC article.
2,909 results