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Page 1
Daily sampling of early SARS-CoV-2 infection reveals substantial heterogeneity in infectiousness.
Ke R, Martinez PP, Smith RL, Gibson LL, Mirza A, Conte M, Gallagher N, Luo CH, Jarrett J, Conte A, Liu T, Farjo M, Walden KKO, Rendon G, Fields CJ, Wang L, Fredrickson R, Edmonson DC, Baughman ME, Chiu KK, Choi H, Scardina KR, Bradley S, Gloss SL, Reinhart C, Yedetore J, Quicksall J, Owens AN, Broach J, Barton B, Lazar P, Heetderks WJ, Robinson ML, Mostafa HH, Manabe YC, Pekosz A, McManus DD, Brooke CB. Ke R, et al. Among authors: mostafa hh. medRxiv [Preprint]. 2021 Jul 12:2021.07.12.21260208. doi: 10.1101/2021.07.12.21260208. medRxiv. 2021. Update in: Nat Microbiol. 2022 May;7(5):640-652. doi: 10.1038/s41564-022-01105-z PMID: 34282424 Free PMC article. Updated. Preprint.
Highly multiplexed oligonucleotide probe-ligation testing enables efficient extraction-free SARS-CoV-2 detection and viral genotyping.
Credle JJ, Robinson ML, Gunn J, Monaco D, Sie B, Tchir A, Hardick J, Zheng X, Shaw-Saliba K, Rothman RE, Eshleman SH, Pekosz A, Hansen K, Mostafa H, Steinegger M, Larman HB. Credle JJ, et al. bioRxiv [Preprint]. 2020 Jun 3:2020.06.03.130591. doi: 10.1101/2020.06.03.130591. bioRxiv. 2020. Update in: Mod Pathol. 2021 Jun;34(6):1093-1103. doi: 10.1038/s41379-020-00730-5 PMID: 32577648 Free PMC article. Updated. Preprint.
Delayed rise of oral fluid antibodies, elevated BMI, and absence of early fever correlate with longer time to SARS-CoV-2 RNA clearance in an longitudinally sampled cohort of COVID-19 outpatients.
Antar AAR, Yu T, Pisanic N, Azamfirei R, Tornheim JA, Brown DM, Kruczynski K, Hardick JP, Sewell T, Jang M, Church T, Walch SN, Reuland C, Bachu VS, Littlefield K, Park HS, Ursin RL, Ganesan A, Kusemiju O, Barnaba B, Charles C, Prizzi M, Johnstone JR, Payton C, Dai W, Fuchs J, Massaccesi G, Armstrong DT, Townsend JL, Keller SC, Demko ZO, Hu C, Wang MC, Sauer LM, Mostafa HH, Keruly JC, Mehta SH, Klein SL, Cox AL, Pekosz A, Heaney CD, Thomas DL, Blair PW, Manabe YC. Antar AAR, et al. Among authors: mostafa hh. medRxiv [Preprint]. 2021 Mar 3:2021.03.02.21252420. doi: 10.1101/2021.03.02.21252420. medRxiv. 2021. Update in: Open Forum Infect Dis. 2021 Apr 16;8(6):ofab195. doi: 10.1093/ofid/ofab195 PMID: 33688688 Free PMC article. Updated. Preprint.
Longitudinal assessment of diagnostic test performance over the course of acute SARS-CoV-2 infection.
Smith RL, Gibson LL, Martinez PP, Ke R, Mirza A, Conte M, Gallagher N, Conte A, Wang L, Fredrickson R, Edmonson DC, Baughman ME, Chiu KK, Choi H, Jensen TW, Scardina KR, Bradley S, Gloss SL, Reinhart C, Yedetore J, Owens AN, Broach J, Barton B, Lazar P, Henness D, Young T, Dunnett A, Robinson ML, Mostafa HH, Pekosz A, Manabe YC, Heetderks WJ, McManus DD, Brooke CB. Smith RL, et al. Among authors: mostafa hh. medRxiv [Preprint]. 2021 Mar 22:2021.03.19.21253964. doi: 10.1101/2021.03.19.21253964. medRxiv. 2021. Update in: J Infect Dis. 2021 Sep 17;224(6):976-982. doi: 10.1093/infdis/jiab337 PMID: 33791719 Free PMC article. Updated. Preprint.
Longitudinal Assessment of Diagnostic Test Performance Over the Course of Acute SARS-CoV-2 Infection.
Smith RL, Gibson LL, Martinez PP, Ke R, Mirza A, Conte M, Gallagher N, Conte A, Wang L, Fredrickson R, Edmonson DC, Baughman ME, Chiu KK, Choi H, Jensen TW, Scardina KR, Bradley S, Gloss SL, Reinhart C, Yedetore J, Owens AN, Broach J, Barton B, Lazar P, Henness D, Young T, Dunnett A, Robinson ML, Mostafa HH, Pekosz A, Manabe YC, Heetderks WJ, McManus DD, Brooke CB. Smith RL, et al. Among authors: mostafa hh. J Infect Dis. 2021 Sep 17;224(6):976-982. doi: 10.1093/infdis/jiab337. J Infect Dis. 2021. PMID: 34191025 Free PMC article.
SARS-CoV-2 Infections in mRNA Vaccinated Individuals are Biased for Viruses Encoding Spike E484K and Associated with Reduced Infectious Virus Loads that Correlate with Respiratory Antiviral IgG levels.
Mostafa HH, Luo CH, Morris CP, Li M, Swanson NJ, Amadi A, Gallagher N, Pekosz A. Mostafa HH, et al. medRxiv [Preprint]. 2021 Jul 7:2021.07.05.21259105. doi: 10.1101/2021.07.05.21259105. medRxiv. 2021. Update in: J Clin Virol. 2022 Jun;150-151:105151. doi: 10.1016/j.jcv.2022.105151 PMID: 34268528 Free PMC article. Updated. Preprint.
Infection with the SARS-CoV-2 Delta Variant is Associated with Higher Infectious Virus Loads Compared to the Alpha Variant in both Unvaccinated and Vaccinated Individuals.
Luo CH, Morris CP, Sachithanandham J, Amadi A, Gaston D, Li M, Swanson NJ, Schwartz M, Klein EY, Pekosz A, Mostafa HH. Luo CH, et al. Among authors: mostafa hh. medRxiv [Preprint]. 2021 Aug 20:2021.08.15.21262077. doi: 10.1101/2021.08.15.21262077. medRxiv. 2021. Update in: Clin Infect Dis. 2022 Aug 24;75(1):e715-e725. doi: 10.1093/cid/ciab986 PMID: 34462756 Free PMC article. Updated. Preprint.
Longitudinal analysis of SARS-CoV-2 vaccine breakthrough infections reveal limited infectious virus shedding and restricted tissue distribution.
Ke R, Martinez PP, Smith RL, Gibson LL, Achenbach CJ, McFall S, Qi C, Jacob J, Dembele E, Bundy C, Simons LM, Ozer EA, Hultquist JF, Lorenzo-Redondo R, Opdycke AK, Hawkins C, Murphy RL, Mirza A, Conte M, Gallagher N, Luo CH, Jarrett J, Conte A, Zhou R, Farjo M, Rendon G, Fields CJ, Wang L, Fredrickson R, Baughman ME, Chiu KK, Choi H, Scardina KR, Owens AN, Broach J, Barton B, Lazar P, Robinson ML, Mostafa HH, Manabe YC, Pekosz A, McManus DD, Brooke CB. Ke R, et al. Among authors: mostafa hh. medRxiv [Preprint]. 2021 Sep 2:2021.08.30.21262701. doi: 10.1101/2021.08.30.21262701. medRxiv. 2021. Update in: Open Forum Infect Dis. 2022 Apr 13;9(7):ofac192. doi: 10.1093/ofid/ofac192 PMID: 34494028 Free PMC article. Updated. Preprint.
A Quick Displacement of the SARS-CoV-2 variant Delta with Omicron: Unprecedented Spike in COVID-19 Cases Associated with Fewer Admissions and Comparable Upper Respiratory Viral Loads.
Fall A, Eldesouki RE, Sachithanandham J, Morris CP, Norton JM, Gaston DC, Forman M, Abdullah O, Gallagher N, Li M, Swanson NJ, Pekosz A, Klein EY, Mostafa HH. Fall A, et al. Among authors: mostafa hh. medRxiv [Preprint]. 2022 Jan 28:2022.01.26.22269927. doi: 10.1101/2022.01.26.22269927. medRxiv. 2022. Update in: EBioMedicine. 2022 May;79:104008. doi: 10.1016/j.ebiom.2022.104008 PMID: 35118480 Free PMC article. Updated. Preprint.
133 results