Vernon I - Search Results

1

June: open-source individual-based epidemiology simulation.

Aylett-Bullock J, Cuesta-Lazaro C, Quera-Bofarull A, Icaza-Lizaola M, Sedgewick A, Truong H, Curran A, Elliott E, Caulfield T, Fong K, Vernon I, Williams J, Bower R, Krauss F. Aylett-Bullock J, et al. Among authors: vernon i. R Soc Open Sci. 2021 Jul 7;8(7):210506. doi: 10.1098/rsos.210506. eCollection 2021 Jul. R Soc Open Sci. 2021. PMID: 34295529 Free PMC article.

2

Bayesian emulation and history matching of JUNE.

Vernon I, Owen J, Aylett-Bullock J, Cuesta-Lazaro C, Frawley J, Quera-Bofarull A, Sedgewick A, Shi D, Truong H, Turner M, Walker J, Caulfield T, Fong K, Krauss F. Vernon I, et al. Philos Trans A Math Phys Eng Sci. 2022 Oct 3;380(2233):20220039. doi: 10.1098/rsta.2022.0039. Epub 2022 Aug 15. Philos Trans A Math Phys Eng Sci. 2022. PMID: 35965471 Free PMC article.

3

Bayesian history matching of complex infectious disease models using emulation: a tutorial and a case study on HIV in Uganda.

Andrianakis I, Vernon IR, McCreesh N, McKinley TJ, Oakley JE, Nsubuga RN, Goldstein M, White RG. Andrianakis I, et al. Among authors: vernon ir. PLoS Comput Biol. 2015 Jan 8;11(1):e1003968. doi: 10.1371/journal.pcbi.1003968. eCollection 2015 Jan. PLoS Comput Biol. 2015. PMID: 25569850 Free PMC article.

4

Bayesian uncertainty analysis for complex systems biology models: emulation, global parameter searches and evaluation of gene functions.

Vernon I, Liu J, Goldstein M, Rowe J, Topping J, Lindsey K. Vernon I, et al. BMC Syst Biol. 2018 Jan 2;12(1):1. doi: 10.1186/s12918-017-0484-3. BMC Syst Biol. 2018. PMID: 29291750 Free PMC article.

5

Understanding hormonal crosstalk in Arabidopsis root development via emulation and history matching.

Jackson SE, Vernon I, Liu J, Lindsey K. Jackson SE, et al. Among authors: vernon i. Stat Appl Genet Mol Biol. 2020 Jul 13;19(2). doi: 10.1515/sagmb-2018-0053. Stat Appl Genet Mol Biol. 2020. PMID: 32649296 Free article.

6

History matching of a complex epidemiological model of human immunodeficiency virus transmission by using variance emulation.

Andrianakis I, Vernon I, McCreesh N, McKinley TJ, Oakley JE, Nsubuga RN, Goldstein M, White RG. Andrianakis I, et al. Among authors: vernon i. J R Stat Soc Ser C Appl Stat. 2017 Aug;66(4):717-740. doi: 10.1111/rssc.12198. Epub 2016 Nov 24. J R Stat Soc Ser C Appl Stat. 2017. PMID: 28781386 Free PMC article.

7

Challenges in estimation, uncertainty quantification and elicitation for pandemic modelling.

Swallow B, Birrell P, Blake J, Burgman M, Challenor P, Coffeng LE, Dawid P, De Angelis D, Goldstein M, Hemming V, Marion G, McKinley TJ, Overton CE, Panovska-Griffiths J, Pellis L, Probert W, Shea K, Villela D, Vernon I. Swallow B, et al. Among authors: vernon i. Epidemics. 2022 Mar;38:100547. doi: 10.1016/j.epidem.2022.100547. Epub 2022 Feb 10. Epidemics. 2022. PMID: 35180542 Free PMC article.

8

Complex model calibration through emulation, a worked example for a stochastic epidemic model.

Dunne M, Mohammadi H, Challenor P, Borgo R, Porphyre T, Vernon I, Firat EE, Turkay C, Torsney-Weir T, Goldstein M, Reeve R, Fang H, Swallow B. Dunne M, et al. Among authors: vernon i. Epidemics. 2022 Jun;39:100574. doi: 10.1016/j.epidem.2022.100574. Epub 2022 May 16. Epidemics. 2022. PMID: 35617882 Free PMC article.

9

Universal test, treat, and keep: improving ART retention is key in cost-effective HIV control in Uganda.

McCreesh N, Andrianakis I, Nsubuga RN, Strong M, Vernon I, McKinley TJ, Oakley JE, Goldstein M, Hayes R, White RG. McCreesh N, et al. Among authors: vernon i. BMC Infect Dis. 2017 May 3;17(1):322. doi: 10.1186/s12879-017-2420-y. BMC Infect Dis. 2017. PMID: 28468605 Free PMC article.

10

Improving ART programme retention and viral suppression are key to maximising impact of treatment as prevention - a modelling study.

McCreesh N, Andrianakis I, Nsubuga RN, Strong M, Vernon I, McKinley TJ, Oakley JE, Goldstein M, Hayes R, White RG. McCreesh N, et al. Among authors: vernon i. BMC Infect Dis. 2017 Aug 9;17(1):557. doi: 10.1186/s12879-017-2664-6. BMC Infect Dis. 2017. PMID: 28793872 Free PMC article.

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