Honda S - Search Results

1

RNase κ promotes robust piRNA production by generating 2',3'-cyclic phosphate-containing precursors.

Shigematsu M, Kawamura T, Morichika K, Izumi N, Kiuchi T, Honda S, Pliatsika V, Matsubara R, Rigoutsos I, Katsuma S, Tomari Y, Kirino Y. Shigematsu M, et al. Among authors: honda s. Nat Commun. 2021 Jul 23;12(1):4498. doi: 10.1038/s41467-021-24681-w. Nat Commun. 2021. PMID: 34301931 Free PMC article.

2

Selective amplification and sequencing of cyclic phosphate-containing RNAs by the cP-RNA-seq method.

Honda S, Morichika K, Kirino Y. Honda S, et al. Nat Protoc. 2016 Mar;11(3):476-89. doi: 10.1038/nprot.2016.025. Epub 2016 Feb 11. Nat Protoc. 2016. PMID: 26866791 Free PMC article.

3

Identification and Functional Analysis of the Pre-piRNA 3' Trimmer in Silkworms.

Izumi N, Shoji K, Sakaguchi Y, Honda S, Kirino Y, Suzuki T, Katsuma S, Tomari Y. Izumi N, et al. Among authors: honda s. Cell. 2016 Feb 25;164(5):962-73. doi: 10.1016/j.cell.2016.01.008. Cell. 2016. PMID: 26919431 Free PMC article.

4

The biogenesis pathway of tRNA-derived piRNAs in Bombyx germ cells.

Honda S, Kawamura T, Loher P, Morichika K, Rigoutsos I, Kirino Y. Honda S, et al. Nucleic Acids Res. 2017 Sep 6;45(15):9108-9120. doi: 10.1093/nar/gkx537. Nucleic Acids Res. 2017. PMID: 28645172 Free PMC article.

5

Increasing cell density globally enhances the biogenesis of Piwi-interacting RNAs in Bombyx mori germ cells.

Honda S, Loher P, Morichika K, Shigematsu M, Kawamura T, Kirino Y, Rigoutsos I, Kirino Y. Honda S, et al. Sci Rep. 2017 Jun 23;7(1):4110. doi: 10.1038/s41598-017-04429-7. Sci Rep. 2017. PMID: 28646211 Free PMC article.

6

Genome-wide identification of short 2',3'-cyclic phosphate-containing RNAs and their regulation in aging.

Shigematsu M, Morichika K, Kawamura T, Honda S, Kirino Y. Shigematsu M, et al. Among authors: honda s. PLoS Genet. 2019 Nov 13;15(11):e1008469. doi: 10.1371/journal.pgen.1008469. eCollection 2019 Nov. PLoS Genet. 2019. PMID: 31721758 Free PMC article.

7

Dumbbell-PCR: a method to quantify specific small RNA variants with a single nucleotide resolution at terminal sequences.

Honda S, Kirino Y. Honda S, et al. Nucleic Acids Res. 2015 Jul 13;43(12):e77. doi: 10.1093/nar/gkv218. Epub 2015 Mar 16. Nucleic Acids Res. 2015. PMID: 25779041 Free PMC article.

8

Four-leaf clover qRT-PCR: A convenient method for selective quantification of mature tRNA.

Honda S, Shigematsu M, Morichika K, Telonis AG, Kirino Y. Honda S, et al. RNA Biol. 2015;12(5):501-8. doi: 10.1080/15476286.2015.1031951. RNA Biol. 2015. PMID: 25833336 Free PMC article.

9

Sex hormone-dependent tRNA halves enhance cell proliferation in breast and prostate cancers.

Honda S, Loher P, Shigematsu M, Palazzo JP, Suzuki R, Imoto I, Rigoutsos I, Kirino Y. Honda S, et al. Proc Natl Acad Sci U S A. 2015 Jul 21;112(29):E3816-25. doi: 10.1073/pnas.1510077112. Epub 2015 Jun 29. Proc Natl Acad Sci U S A. 2015. PMID: 26124144 Free PMC article.

10

SHOT-RNAs: A novel class of tRNA-derived functional RNAs expressed in hormone-dependent cancers.

Honda S, Kirino Y. Honda S, et al. Mol Cell Oncol. 2015 Nov 23;3(2):e1079672. doi: 10.1080/23723556.2015.1079672. eCollection 2016 Mar. Mol Cell Oncol. 2015. PMID: 27308603 Free PMC article.

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