Carbonell J - Search Results

1

A set of accessible enhancers enables the initial response of breast cancer cells to physiological progestin concentrations.

Zaurin R, Ferrari R, Nacht AS, Carbonell J, Le Dily F, Font-Mateu J, de Llobet Cucalon LI, Vidal E, Lioutas A, Beato M, Vicent GP. Zaurin R, et al. Among authors: carbonell j. Nucleic Acids Res. 2021 Dec 16;49(22):12716-12731. doi: 10.1093/nar/gkab1125. Nucleic Acids Res. 2021. PMID: 34850111 Free PMC article.

2

Serial Expression Analysis: a web tool for the analysis of serial gene expression data.

Nueda MJ, Carbonell J, Medina I, Dopazo J, Conesa A. Nueda MJ, et al. Among authors: carbonell j. Nucleic Acids Res. 2010 Jul;38(Web Server issue):W239-45. doi: 10.1093/nar/gkq488. Epub 2010 Jun 4. Nucleic Acids Res. 2010. PMID: 20525784 Free PMC article.

3

Gene set-based analysis of polymorphisms: finding pathways or biological processes associated to traits in genome-wide association studies.

Medina I, Montaner D, Bonifaci N, Pujana MA, Carbonell J, Tarraga J, Al-Shahrour F, Dopazo J. Medina I, et al. Among authors: carbonell j. Nucleic Acids Res. 2009 Jul;37(Web Server issue):W340-4. doi: 10.1093/nar/gkp481. Epub 2009 Jun 5. Nucleic Acids Res. 2009. PMID: 19502494 Free PMC article.

4

Inferring the functional effect of gene expression changes in signaling pathways.

Sebastián-León P, Carbonell J, Salavert F, Sanchez R, Medina I, Dopazo J. Sebastián-León P, et al. Among authors: carbonell j. Nucleic Acids Res. 2013 Jul;41(Web Server issue):W213-7. doi: 10.1093/nar/gkt451. Epub 2013 Jun 8. Nucleic Acids Res. 2013. PMID: 23748960 Free PMC article.

5

GEPAS, a web-based tool for microarray data analysis and interpretation.

Tárraga J, Medina I, Carbonell J, Huerta-Cepas J, Minguez P, Alloza E, Al-Shahrour F, Vegas-Azcárate S, Goetz S, Escobar P, Garcia-Garcia F, Conesa A, Montaner D, Dopazo J. Tárraga J, et al. Among authors: carbonell j. Nucleic Acids Res. 2008 Jul 1;36(Web Server issue):W308-14. doi: 10.1093/nar/gkn303. Epub 2008 May 28. Nucleic Acids Res. 2008. PMID: 18508806 Free PMC article.

6

Babelomics: advanced functional profiling of transcriptomics, proteomics and genomics experiments.

Al-Shahrour F, Carbonell J, Minguez P, Goetz S, Conesa A, Tárraga J, Medina I, Alloza E, Montaner D, Dopazo J. Al-Shahrour F, et al. Among authors: carbonell j. Nucleic Acids Res. 2008 Jul 1;36(Web Server issue):W341-6. doi: 10.1093/nar/gkn318. Epub 2008 May 31. Nucleic Acids Res. 2008. PMID: 18515841 Free PMC article.

7

Phylemon 2.0: a suite of web-tools for molecular evolution, phylogenetics, phylogenomics and hypotheses testing.

Sánchez R, Serra F, Tárraga J, Medina I, Carbonell J, Pulido L, de María A, Capella-Gutíerrez S, Huerta-Cepas J, Gabaldón T, Dopazo J, Dopazo H. Sánchez R, et al. Among authors: carbonell j. Nucleic Acids Res. 2011 Jul;39(Web Server issue):W470-4. doi: 10.1093/nar/gkr408. Epub 2011 Jun 6. Nucleic Acids Res. 2011. PMID: 21646336 Free PMC article.

8

A map of human microRNA variation uncovers unexpectedly high levels of variability.

Carbonell J, Alloza E, Arce P, Borrego S, Santoyo J, Ruiz-Ferrer M, Medina I, Jiménez-Almazán J, Méndez-Vidal C, González-Del Pozo M, Vela A, Bhattacharya SS, Antiñolo G, Dopazo J. Carbonell J, et al. Genome Med. 2012 Aug 24;4(8):62. doi: 10.1186/gm363. eCollection 2012. Genome Med. 2012. PMID: 22906193 Free PMC article.

9

Qualimap: evaluating next-generation sequencing alignment data.

García-Alcalde F, Okonechnikov K, Carbonell J, Cruz LM, Götz S, Tarazona S, Dopazo J, Meyer TF, Conesa A. García-Alcalde F, et al. Among authors: carbonell j. Bioinformatics. 2012 Oct 15;28(20):2678-9. doi: 10.1093/bioinformatics/bts503. Epub 2012 Aug 22. Bioinformatics. 2012. PMID: 22914218

10

Involvement of a citrus meiotic recombination TTC-repeat motif in the formation of gross deletions generated by ionizing radiation and MULE activation.

Terol J, Ibañez V, Carbonell J, Alonso R, Estornell LH, Licciardello C, Gut IG, Dopazo J, Talon M. Terol J, et al. Among authors: carbonell j. BMC Genomics. 2015 Feb 13;16(1):69. doi: 10.1186/s12864-015-1280-3. BMC Genomics. 2015. PMID: 25758634 Free PMC article.

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