Tong W - Search Results

1

Author Correction: The SEQC2 epigenomics quality control (EpiQC) study.

Foox J, Nordlund J, Lalancette C, Gong T, Lacey M, Lent S, Langhorst BW, Ponnaluri VKC, Williams L, Padmanabhan KR, Cavalcante R, Lundmark A, Butler D, Mozsary C, Gurvitch J, Greally JM, Suzuki M, Menor M, Nasu M, Alonso A, Sheridan C, Scherer A, Bruinsma S, Golda G, Muszynska A, Łabaj PP, Campbell MA, Wos F, Raine A, Liljedahl U, Axelsson T, Wang C, Chen Z, Yang Z, Li J, Yang X, Wang H, Melnick A, Guo S, Blume A, Franke V, de Caceres II, Rodriguez-Antolin C, Rosas R, Davis JW, Ishii J, Megherbi DB, Xiao W, Liao W, Xu J, Hong H, Ning B, Tong W, Akalin A, Wang Y, Deng Y, Mason CE. Foox J, et al. Among authors: tong w. Genome Biol. 2021 Dec 23;22(1):350. doi: 10.1186/s13059-021-02573-y. Genome Biol. 2021. PMID: 34949218 Free PMC article. No abstract available.

2

Decision forest: combining the predictions of multiple independent decision tree models.

Tong W, Hong H, Fang H, Xie Q, Perkins R. Tong W, et al. J Chem Inf Comput Sci. 2003 Mar-Apr;43(2):525-31. doi: 10.1021/ci020058s. J Chem Inf Comput Sci. 2003. PMID: 12653517

3

Assessment of prediction confidence and domain extrapolation of two structure-activity relationship models for predicting estrogen receptor binding activity.

Tong W, Xie Q, Hong H, Shi L, Fang H, Perkins R. Tong W, et al. Environ Health Perspect. 2004 Aug;112(12):1249-54. doi: 10.1289/txg.7125. Environ Health Perspect. 2004. PMID: 15345371 Free PMC article.

4

Multiclass Decision Forest--a novel pattern recognition method for multiclass classification in microarray data analysis.

Hong H, Tong W, Perkins R, Fang H, Xie Q, Shi L. Hong H, et al. Among authors: tong w. DNA Cell Biol. 2004 Oct;23(10):685-94. doi: 10.1089/dna.2004.23.685. DNA Cell Biol. 2004. PMID: 15585126

5

Decision forest analysis of 61 single nucleotide polymorphisms in a case-control study of esophageal cancer; a novel method.

Xie Q, Ratnasinghe LD, Hong H, Perkins R, Tang ZZ, Hu N, Taylor PR, Tong W. Xie Q, et al. Among authors: tong w. BMC Bioinformatics. 2005 Jul 15;6 Suppl 2(Suppl 2):S4. doi: 10.1186/1471-2105-6-S2-S4. BMC Bioinformatics. 2005. PMID: 16026601 Free PMC article.

6

An in silico ensemble method for lead discovery: decision forest.

Hong H, Tong W, Xie Q, Fang H, Perkins R. Hong H, et al. Among authors: tong w. SAR QSAR Environ Res. 2005 Aug;16(4):339-47. doi: 10.1080/10659360500203022. SAR QSAR Environ Res. 2005. PMID: 16234175

7

Assessing batch effects of genotype calling algorithm BRLMM for the Affymetrix GeneChip Human Mapping 500 K array set using 270 HapMap samples.

Hong H, Su Z, Ge W, Shi L, Perkins R, Fang H, Xu J, Chen JJ, Han T, Kaput J, Fuscoe JC, Tong W. Hong H, et al. Among authors: tong w. BMC Bioinformatics. 2008 Aug 12;9 Suppl 9(Suppl 9):S17. doi: 10.1186/1471-2105-9-S9-S17. BMC Bioinformatics. 2008. PMID: 18793462 Free PMC article.

8

Very Important Pool (VIP) genes--an application for microarray-based molecular signatures.

Su Z, Hong H, Fang H, Shi L, Perkins R, Tong W. Su Z, et al. Among authors: tong w. BMC Bioinformatics. 2008 Aug 12;9 Suppl 9(Suppl 9):S9. doi: 10.1186/1471-2105-9-S9-S9. BMC Bioinformatics. 2008. PMID: 18793473 Free PMC article.

9

Correlation analysis of external RNA controls reveals its utility for assessment of microarray assay.

Fan X, Fang H, Hong H, Perkins R, Shi L, Tong W. Fan X, et al. Among authors: tong w. Anal Biochem. 2009 Feb 15;385(2):203-7. doi: 10.1016/j.ab.2008.11.019. Epub 2008 Dec 6. Anal Biochem. 2009. PMID: 19059192

10

The accurate prediction of protein family from amino acid sequence by measuring features of sequence fragments.

Hong H, Hong Q, Perkins R, Shi L, Fang H, Su Z, Dragan Y, Fuscoe JC, Tong W. Hong H, et al. Among authors: tong w. J Comput Biol. 2009 Dec;16(12):1671-88. doi: 10.1089/cmb.2008.0115. J Comput Biol. 2009. PMID: 20047490

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