Styczynski MP - Search Results

1

Diverse classes of constraints enable broader applicability of a linear programming-based dynamic metabolic modeling framework.

Lee JY, Styczynski MP. Lee JY, et al. Among authors: styczynski mp. Sci Rep. 2022 Jan 14;12(1):762. doi: 10.1038/s41598-021-03934-0. Sci Rep. 2022. PMID: 35031616 Free PMC article.

2

NS-kNN: a modified k-nearest neighbors approach for imputing metabolomics data.

Lee JY, Styczynski MP. Lee JY, et al. Among authors: styczynski mp. Metabolomics. 2018 Nov 23;14(12):153. doi: 10.1007/s11306-018-1451-8. Metabolomics. 2018. PMID: 30830437 Free PMC article.

3

LK-DFBA: a linear programming-based modeling strategy for capturing dynamics and metabolite-dependent regulation in metabolism.

Dromms RA, Lee JY, Styczynski MP. Dromms RA, et al. Among authors: styczynski mp. BMC Bioinformatics. 2020 Mar 2;21(1):93. doi: 10.1186/s12859-020-3422-0. BMC Bioinformatics. 2020. PMID: 32122331 Free PMC article.

4

SCOUR: a stepwise machine learning framework for predicting metabolite-dependent regulatory interactions.

Lee JY, Nguyen B, Orosco C, Styczynski MP. Lee JY, et al. Among authors: styczynski mp. BMC Bioinformatics. 2021 Jul 8;22(1):365. doi: 10.1186/s12859-021-04281-7. BMC Bioinformatics. 2021. PMID: 34238207 Free PMC article.

5

Dramatic transcriptomic differences in Macaca mulatta and Macaca fascicularis with Plasmodium knowlesi infections.

Gupta A, Styczynski MP, Galinski MR, Voit EO, Fonseca LL. Gupta A, et al. Among authors: styczynski mp. Sci Rep. 2021 Sep 30;11(1):19519. doi: 10.1038/s41598-021-98024-6. Sci Rep. 2021. PMID: 34593836 Free PMC article.

6

Towards inferring absolute concentrations from relative abundance in time-course GC-MS metabolomics data.

Lee JY, Han Y, Styczynski MP. Lee JY, et al. Among authors: styczynski mp. Mol Omics. 2023 Feb 20;19(2):126-136. doi: 10.1039/d2mo00168c. Mol Omics. 2023. PMID: 36374123 Free PMC article.

7

Systematic applications of metabolomics in metabolic engineering.

Dromms RA, Styczynski MP. Dromms RA, et al. Among authors: styczynski mp. Metabolites. 2012 Dec 14;2(4):1090-122. doi: 10.3390/metabo2041090. Metabolites. 2012. PMID: 24957776 Free PMC article.

8

Assessing structural uncertainty of biochemical regulatory networks in metabolic pathways under varying data quality.

Han Y, Styczynski MP. Han Y, et al. Among authors: styczynski mp. NPJ Syst Biol Appl. 2024 Aug 22;10(1):94. doi: 10.1038/s41540-024-00412-x. NPJ Syst Biol Appl. 2024. PMID: 39174554 Free PMC article.

9

Precise metabolic engineering of carotenoid biosynthesis in Escherichia coli towards a low-cost biosensor.

Watstein DM, McNerney MP, Styczynski MP. Watstein DM, et al. Among authors: styczynski mp. Metab Eng. 2015 Sep;31:171-80. doi: 10.1016/j.ymben.2015.06.007. Epub 2015 Jun 30. Metab Eng. 2015. PMID: 26141149 Free PMC article.

10

Improved metabolite profile smoothing for flux estimation.

Dromms RA, Styczynski MP. Dromms RA, et al. Among authors: styczynski mp. Mol Biosyst. 2015 Sep;11(9):2394-405. doi: 10.1039/c5mb00165j. Epub 2015 Jul 14. Mol Biosyst. 2015. PMID: 26172986

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