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Page 1
The Earth BioGenome Project 2020: Starting the clock.
Lewin HA, Richards S, Lieberman Aiden E, Allende ML, Archibald JM, Bálint M, Barker KB, Baumgartner B, Belov K, Bertorelle G, Blaxter ML, Cai J, Caperello ND, Carlson K, Castilla-Rubio JC, Chaw SM, Chen L, Childers AK, Coddington JA, Conde DA, Corominas M, Crandall KA, Crawford AJ, DiPalma F, Durbin R, Ebenezer TE, Edwards SV, Fedrigo O, Flicek P, Formenti G, Gibbs RA, Gilbert MTP, Goldstein MM, Graves JM, Greely HT, Grigoriev IV, Hackett KJ, Hall N, Haussler D, Helgen KM, Hogg CJ, Isobe S, Jakobsen KS, Janke A, Jarvis ED, Johnson WE, Jones SJM, Karlsson EK, Kersey PJ, Kim JH, Kress WJ, Kuraku S, Lawniczak MKN, Leebens-Mack JH, Li X, Lindblad-Toh K, Liu X, Lopez JV, Marques-Bonet T, Mazard S, Mazet JAK, Mazzoni CJ, Myers EW, O'Neill RJ, Paez S, Park H, Robinson GE, Roquet C, Ryder OA, Sabir JSM, Shaffer HB, Shank TM, Sherkow JS, Soltis PS, Tang B, Tedersoo L, Uliano-Silva M, Wang K, Wei X, Wetzer R, Wilson JL, Xu X, Yang H, Yoder AD, Zhang G. Lewin HA, et al. Among authors: ebenezer te. Proc Natl Acad Sci U S A. 2022 Jan 25;119(4):e2115635118. doi: 10.1073/pnas.2115635118. Proc Natl Acad Sci U S A. 2022. PMID: 35042800 Free PMC article. No abstract available.
Africa: sequence 100,000 species to safeguard biodiversity.
Ebenezer TE, Muigai AWT, Nouala S, Badaoui B, Blaxter M, Buddie AG, Jarvis ED, Korlach J, Kuja JO, Lewin HA, Majewska R, Mapholi N, Maslamoney S, Mbo'o-Tchouawou M, Osuji JO, Seehausen O, Shorinola O, Tiambo CK, Mulder N, Ziyomo C, Djikeng A. Ebenezer TE, et al. Nature. 2022 Mar;603(7901):388-392. doi: 10.1038/d41586-022-00712-4. Nature. 2022. PMID: 35292740 No abstract available.
The Nigerian Bioinformatics and Genomics Network (NBGN): a collaborative platform to advance bioinformatics and genomics in Nigeria.
Fatumo S, Ebenezer TE, Ekenna C, Isewon I, Ahmad U, Adetunji C, Oladipo EK, Adebiyi M, Adebiyi E, Nashiru O; Nigerian Bioinformatics and Genomics Network. Fatumo S, et al. Among authors: ebenezer te. Glob Health Epidemiol Genom. 2020 Jul 15;5:e3. doi: 10.1017/gheg.2020.3. eCollection 2020. Glob Health Epidemiol Genom. 2020. PMID: 32742665 Free PMC article.
Establishing African genomics and bioinformatics programs through annual regional workshops.
Sharaf A, Nesengani LT, Hayah I, Kuja JO, Mdyogolo S, Omotoriogun TC, Odogwu BA, Beedessee G, Smith RM, Barakat A, Moila AM, El Hamouchi A, Benkahla A, Boukteb A, Elmouhtadi A, Mafwila AL, Abushady AM, Elsherif AK, Ahmed B, Wairuri C, Ndiribe CC, Ebuzome C, Kinnear CJ, Ndlovu DF, Iraqi D, El Fahime E, Assefa E, Ouardi F, Belharfi FZ, Tmimi FZ, Markey FB, Radouani F, Zeukeng F, Mvumbi GL, Ganesan H, Hanachi M, Nigussie H, Charoute H, Benamri I, Mkedder I, Haddadi I, Meftah-Kadmiri I, Mubiru JF, Domelevo Entfellner JK, Rokani JB, Ogwang J, Daiga JB, Omumbo J, Ideozu JE, Errafii K, Labuschagne K, Komi KK, Tonfack LB, Hadjeras L, Ramantswana M, Chaisi M, Botes MW, Kilian M, Kvas M, Melloul M, Chaouch M, Khyatti M, Abdo M, Phasha-Muchemenye M, Hijri M, Mediouni MR, Hassan MA, Piro M, Mwale M, Maaloum M, Mavhunga M, Olivier NA, Aminou O, Arbani O, Souiai O, Djocgoue PF, Mentag R, Zipfel RD, Tata RB, Megnekou R, Muzemil S, Paez S, Salifu SP, Kagame SP, Selka S, Edwards S, Gaouar SBS, Reda SRA, Fellahi S, Khayi S, Ayed S, Madisha T, Sahil T, Udensi OU, Ras V, Ezebuiro V, Duru VC, David X, Geberemichael Y, Tchiechoua YH, Mungloo-Dilmohamud Z, Chen Z, Happi C, Kariuki T, Ziyomo C, Djikeng A… See abstract for full author list ➔ Sharaf A, et al. Among authors: ebenezer te. Nat Genet. 2024 Aug;56(8):1556-1565. doi: 10.1038/s41588-024-01807-6. Epub 2024 Jul 8. Nat Genet. 2024. PMID: 38977855 Review.
Bridging the gap in African biodiversity genomics and bioinformatics.
Sharaf A, Ndiribe CC, Omotoriogun TC, Abueg L, Badaoui B, Badiane Markey FJ, Beedessee G, Diouf D, Duru VC, Ebuzome C, Eziuzor SC, Jaufeerally Fakim Y, Formenti G, Ghanmi N, Guerfali FZ, Houaga I, Ideozu JE, Katee SM, Khayi S, Kuja JO, Kwon-Ndung EH, Marks RA, Moila AM, Mungloo-Dilmohamud Z, Muzemil S, Nigussie H, Osuji JO, Ras V, Tchiechoua YH, Zoclanclounon YAB, Tolley KA, Ziyomo C, Mapholi N, Muigai AWT, Djikeng A, Ebenezer TE. Sharaf A, et al. Among authors: ebenezer te. Nat Biotechnol. 2023 Sep;41(9):1348-1354. doi: 10.1038/s41587-023-01933-2. Nat Biotechnol. 2023. PMID: 37699986 No abstract available.
Euglena International Network (EIN): Driving euglenoid biotechnology for the benefit of a challenged world.
Ebenezer TE, Low RS, O'Neill EC, Huang I, DeSimone A, Farrow SC, Field RA, Ginger ML, Guerrero SA, Hammond M, Hampl V, Horst G, Ishikawa T, Karnkowska A, Linton EW, Myler P, Nakazawa M, Cardol P, Sánchez-Thomas R, Saville BJ, Shah MR, Simpson AGB, Sur A, Suzuki K, Tyler KM, Zimba PV, Hall N, Field MC. Ebenezer TE, et al. Biol Open. 2022 Nov 1;11(11):bio059561. doi: 10.1242/bio.059561. Epub 2022 Nov 22. Biol Open. 2022. PMID: 36412269 Free PMC article.
Metabolic quirks and the colourful history of the Euglena gracilis secondary plastid.
Novák Vanclová AMG, Zoltner M, Kelly S, Soukal P, Záhonová K, Füssy Z, Ebenezer TE, Lacová Dobáková E, Eliáš M, Lukeš J, Field MC, Hampl V. Novák Vanclová AMG, et al. Among authors: ebenezer te. New Phytol. 2020 Feb;225(4):1578-1592. doi: 10.1111/nph.16237. Epub 2019 Nov 4. New Phytol. 2020. PMID: 31580486 Free article.
Transcriptome, proteome and draft genome of Euglena gracilis.
Ebenezer TE, Zoltner M, Burrell A, Nenarokova A, Novák Vanclová AMG, Prasad B, Soukal P, Santana-Molina C, O'Neill E, Nankissoor NN, Vadakedath N, Daiker V, Obado S, Silva-Pereira S, Jackson AP, Devos DP, Lukeš J, Lebert M, Vaughan S, Hampl V, Carrington M, Ginger ML, Dacks JB, Kelly S, Field MC. Ebenezer TE, et al. BMC Biol. 2019 Feb 7;17(1):11. doi: 10.1186/s12915-019-0626-8. BMC Biol. 2019. PMID: 30732613 Free PMC article.