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Page 1
Reverse Transcriptase Inhibition Disrupts Repeat Element Life Cycle in Colorectal Cancer.
Rajurkar M, Parikh AR, Solovyov A, You E, Kulkarni AS, Chu C, Xu KH, Jaicks C, Taylor MS, Wu C, Alexander KA, Good CR, Szabolcs A, Gerstberger S, Tran AV, Xu N, Ebright RY, Van Seventer EE, Vo KD, Tai EC, Lu C, Joseph-Chazan J, Raabe MJ, Nieman LT, Desai N, Arora KS, Ligorio M, Thapar V, Cohen L, Garden PM, Senussi Y, Zheng H, Allen JN, Blaszkowsky LS, Clark JW, Goyal L, Wo JY, Ryan DP, Corcoran RB, Deshpande V, Rivera MN, Aryee MJ, Hong TS, Berger SL, Walt DR, Burns KH, Park PJ, Greenbaum BD, Ting DT. Rajurkar M, et al. Among authors: greenbaum bd. Cancer Discov. 2022 Jun 2;12(6):1462-1481. doi: 10.1158/2159-8290.CD-21-1117. Cancer Discov. 2022. PMID: 35320348 Free PMC article.
Distinguishing the immunostimulatory properties of noncoding RNAs expressed in cancer cells.
Tanne A, Muniz LR, Puzio-Kuter A, Leonova KI, Gudkov AV, Ting DT, Monasson R, Cocco S, Levine AJ, Bhardwaj N, Greenbaum BD. Tanne A, et al. Among authors: greenbaum bd. Proc Natl Acad Sci U S A. 2015 Dec 8;112(49):15154-9. doi: 10.1073/pnas.1517584112. Epub 2015 Nov 2. Proc Natl Acad Sci U S A. 2015. PMID: 26575629 Free PMC article.
Diverse repetitive element RNA expression defines epigenetic and immunologic features of colon cancer.
Desai N, Sajed D, Arora KS, Solovyov A, Rajurkar M, Bledsoe JR, Sil S, Amri R, Tai E, MacKenzie OC, Mino-Kenudson M, Aryee MJ, Ferrone CR, Berger DL, Rivera MN, Greenbaum BD, Deshpande V, Ting DT. Desai N, et al. Among authors: greenbaum bd. JCI Insight. 2017 Feb 9;2(3):e91078. doi: 10.1172/jci.insight.91078. JCI Insight. 2017. PMID: 28194445 Free PMC article.
Transcriptional dissection of melanoma identifies a high-risk subtype underlying TP53 family genes and epigenome deregulation.
Badal B, Solovyov A, Di Cecilia S, Chan JM, Chang LW, Iqbal R, Aydin IT, Rajan GS, Chen C, Abbate F, Arora KS, Tanne A, Gruber SB, Johnson TM, Fullen DR, Raskin L, Phelps R, Bhardwaj N, Bernstein E, Ting DT, Brunner G, Schadt EE, Greenbaum BD, Celebi JT. Badal B, et al. Among authors: greenbaum bd. JCI Insight. 2017 May 4;2(9):e92102. doi: 10.1172/jci.insight.92102. eCollection 2017 May 4. JCI Insight. 2017. PMID: 28469092 Free PMC article.
A tumor-specific endogenous repetitive element is induced by herpesviruses.
Nogalski MT, Solovyov A, Kulkarni AS, Desai N, Oberstein A, Levine AJ, Ting DT, Shenk T, Greenbaum BD. Nogalski MT, et al. Among authors: greenbaum bd. Nat Commun. 2019 Jan 9;10(1):90. doi: 10.1038/s41467-018-07944-x. Nat Commun. 2019. PMID: 30626867 Free PMC article.
Temporal and Spatial Heterogeneity of Host Response to SARS-CoV-2 Pulmonary Infection.
Desai N, Neyaz A, Szabolcs A, Shih AR, Chen JH, Thapar V, Nieman LT, Solovyov A, Mehta A, Lieb DJ, Kulkarni AS, Jaicks C, Pinto CJ, Juric D, Chebib I, Colvin RB, Kim AY, Monroe R, Warren SE, Danaher P, Reeves JW, Gong J, Rueckert EH, Greenbaum BD, Hacohen N, Lagana SM, Rivera MN, Sholl LM, Stone JR, Ting DT, Deshpande V. Desai N, et al. Among authors: greenbaum bd. medRxiv [Preprint]. 2020 Aug 2:2020.07.30.20165241. doi: 10.1101/2020.07.30.20165241. medRxiv. 2020. Update in: Nat Commun. 2020 Dec 9;11(1):6319. doi: 10.1038/s41467-020-20139-7 PMID: 32766600 Free PMC article. Updated. Preprint.
98 results