Parks JM - Search Results

1

Hit Expansion of a Noncovalent SARS-CoV-2 Main Protease Inhibitor.

Glaser J, Sedova A, Galanie S, Kneller DW, Davidson RB, Maradzike E, Del Galdo S, Labbé A, Hsu DJ, Agarwal R, Bykov D, Tharrington A, Parks JM, Smith DMA, Daidone I, Coates L, Kovalevsky A, Smith JC. Glaser J, et al. Among authors: parks jm. ACS Pharmacol Transl Sci. 2022 Apr 4;5(4):255-265. doi: 10.1021/acsptsci.2c00026. eCollection 2022 Apr 8. ACS Pharmacol Transl Sci. 2022. PMID: 35434531 Free PMC article.

2

Mechanism of Hg-C protonolysis in the organomercurial lyase MerB.

Parks JM, Guo H, Momany C, Liang L, Miller SM, Summers AO, Smith JC. Parks JM, et al. J Am Chem Soc. 2009 Sep 23;131(37):13278-85. doi: 10.1021/ja9016123. J Am Chem Soc. 2009. PMID: 19719173

3

Structure and conformational dynamics of the metalloregulator MerR upon binding of Hg(II).

Guo HB, Johs A, Parks JM, Olliff L, Miller SM, Summers AO, Liang L, Smith JC. Guo HB, et al. Among authors: parks jm. J Mol Biol. 2010 May 14;398(4):555-68. doi: 10.1016/j.jmb.2010.03.020. Epub 2010 Mar 19. J Mol Biol. 2010. PMID: 20303978

4

Structural characterization of intramolecular Hg(2+) transfer between flexibly linked domains of mercuric ion reductase.

Johs A, Harwood IM, Parks JM, Nauss RE, Smith JC, Liang L, Miller SM. Johs A, et al. Among authors: parks jm. J Mol Biol. 2011 Oct 28;413(3):639-56. doi: 10.1016/j.jmb.2011.08.042. Epub 2011 Aug 26. J Mol Biol. 2011. PMID: 21893070

5

Radical coupling reactions in lignin synthesis: a density functional theory study.

Sangha AK, Parks JM, Standaert RF, Ziebell A, Davis M, Smith JC. Sangha AK, et al. Among authors: parks jm. J Phys Chem B. 2012 Apr 26;116(16):4760-8. doi: 10.1021/jp2122449. Epub 2012 Apr 13. J Phys Chem B. 2012. PMID: 22475051

6

Chemical factors that control lignin polymerization.

Sangha AK, Davison BH, Standaert RF, Davis MF, Smith JC, Parks JM. Sangha AK, et al. Among authors: parks jm. J Phys Chem B. 2014 Jan 9;118(1):164-70. doi: 10.1021/jp411998t. Epub 2013 Dec 30. J Phys Chem B. 2014. PMID: 24341896

7

Mercury methylation by HgcA: theory supports carbanion transfer to Hg(II).

Zhou J, Riccardi D, Beste A, Smith JC, Parks JM. Zhou J, et al. Among authors: parks jm. Inorg Chem. 2014 Jan 21;53(2):772-7. doi: 10.1021/ic401992y. Epub 2013 Dec 30. Inorg Chem. 2014. PMID: 24377658

8

Hydrolysis of DFP and the nerve agent (S)-sarin by DFPase proceeds along two different reaction pathways: implications for engineering bioscavengers.

Wymore T, Field MJ, Langan P, Smith JC, Parks JM. Wymore T, et al. Among authors: parks jm. J Phys Chem B. 2014 May 1;118(17):4479-89. doi: 10.1021/jp410422c. Epub 2014 Apr 21. J Phys Chem B. 2014. PMID: 24720808 Free PMC article.

9

L-Arabinose binding, isomerization, and epimerization by D-xylose isomerase: X-ray/neutron crystallographic and molecular simulation study.

Langan P, Sangha AK, Wymore T, Parks JM, Yang ZK, Hanson BL, Fisher Z, Mason SA, Blakeley MP, Forsyth VT, Glusker JP, Carrell HL, Smith JC, Keen DA, Graham DE, Kovalevsky A. Langan P, et al. Among authors: parks jm. Structure. 2014 Sep 2;22(9):1287-1300. doi: 10.1016/j.str.2014.07.002. Epub 2014 Aug 14. Structure. 2014. PMID: 25132082 Free article.

10

HackaMol: An Object-Oriented Modern Perl Library for Molecular Hacking on Multiple Scales.

Riccardi D, Parks JM, Johs A, Smith JC. Riccardi D, et al. Among authors: parks jm. J Chem Inf Model. 2015 Apr 27;55(4):721-6. doi: 10.1021/ci500359e. Epub 2015 Apr 2. J Chem Inf Model. 2015. PMID: 25793330

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