Ai D - Search Results

1

Joint Analysis of Microbial and Immune Cell Abundance in Liver Cancer Tissue Using a Gene Expression Profile Deconvolution Algorithm Combined With Foreign Read Remapping.

Ai D, Xing Y, Zhang Q, Wang Y, Liu X, Liu G, Xia LC. Ai D, et al. Front Immunol. 2022 Apr 14;13:853213. doi: 10.3389/fimmu.2022.853213. eCollection 2022. Front Immunol. 2022. PMID: 35493464 Free PMC article.

2

Efficient statistical significance approximation for local similarity analysis of high-throughput time series data.

Xia LC, Ai D, Cram J, Fuhrman JA, Sun F. Xia LC, et al. Among authors: ai d. Bioinformatics. 2013 Jan 15;29(2):230-7. doi: 10.1093/bioinformatics/bts668. Epub 2012 Nov 23. Bioinformatics. 2013. PMID: 23178636 Free PMC article.

3

Statistical significance approximation in local trend analysis of high-throughput time-series data using the theory of Markov chains.

Xia LC, Ai D, Cram JA, Liang X, Fuhrman JA, Sun F. Xia LC, et al. Among authors: ai d. BMC Bioinformatics. 2015 Sep 21;16:301. doi: 10.1186/s12859-015-0732-8. BMC Bioinformatics. 2015. PMID: 26390921 Free PMC article.

4

Integrated metagenomic data analysis demonstrates that a loss of diversity in oral microbiota is associated with periodontitis.

Ai D, Huang R, Wen J, Li C, Zhu J, Xia LC. Ai D, et al. BMC Genomics. 2017 Jan 25;18(Suppl 1):1041. doi: 10.1186/s12864-016-3254-5. BMC Genomics. 2017. PMID: 28198672 Free PMC article.

5

CoreProbe: A Novel Algorithm for Estimating Relative Abundance Based on Metagenomic Reads.

Ai D, Pan H, Huang R, Xia LC. Ai D, et al. Genes (Basel). 2018 Jun 20;9(6):313. doi: 10.3390/genes9060313. Genes (Basel). 2018. PMID: 29925824 Free PMC article.

6

SVEngine: an efficient and versatile simulator of genome structural variations with features of cancer clonal evolution.

Xia LC, Ai D, Lee H, Andor N, Li C, Zhang NR, Ji HP. Xia LC, et al. Among authors: ai d. Gigascience. 2018 Jul 1;7(7):giy081. doi: 10.1093/gigascience/giy081. Gigascience. 2018. PMID: 29982625 Free PMC article.

7

Using Decision Tree Aggregation with Random Forest Model to Identify Gut Microbes Associated with Colorectal Cancer.

Ai D, Pan H, Han R, Li X, Liu G, Xia LC. Ai D, et al. Genes (Basel). 2019 Feb 1;10(2):112. doi: 10.3390/genes10020112. Genes (Basel). 2019. PMID: 30717284 Free PMC article.

8

Constructing the Microbial Association Network from Large-Scale Time Series Data Using Granger Causality.

Ai D, Li X, Liu G, Liang X, Xia LC. Ai D, et al. Genes (Basel). 2019 Mar 14;10(3):216. doi: 10.3390/genes10030216. Genes (Basel). 2019. PMID: 30875820 Free PMC article.

9

Explore mediated co-varying dynamics in microbial community using integrated local similarity and liquid association analysis.

Ai D, Li X, Pan H, Chen J, Cram JA, Xia LC. Ai D, et al. BMC Genomics. 2019 Apr 4;20(Suppl 2):185. doi: 10.1186/s12864-019-5469-8. BMC Genomics. 2019. PMID: 30967122 Free PMC article.

10

Prediction of Long Non-Coding RNAs Based on Deep Learning.

Liu XQ, Li BX, Zeng GR, Liu QY, Ai DM. Liu XQ, et al. Genes (Basel). 2019 Apr 3;10(4):273. doi: 10.3390/genes10040273. Genes (Basel). 2019. PMID: 30987229 Free PMC article.

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