Han J - Search Results

1

DAISM-DNN^XMBD: Highly accurate cell type proportion estimation with in silico data augmentation and deep neural networks.

Lin Y, Li H, Xiao X, Zhang L, Wang K, Zhao J, Wang M, Zheng F, Zhang M, Yang W, Han J, Yu R. Lin Y, et al. Among authors: han j. Patterns (N Y). 2022 Feb 3;3(3):100440. doi: 10.1016/j.patter.2022.100440. eCollection 2022 Mar 11. Patterns (N Y). 2022. PMID: 35510186 Free PMC article.

2

Dice-XMBD: Deep Learning-Based Cell Segmentation for Imaging Mass Cytometry.

Xiao X, Qiao Y, Jiao Y, Fu N, Yang W, Wang L, Yu R, Han J. Xiao X, et al. Among authors: han j. Front Genet. 2021 Sep 15;12:721229. doi: 10.3389/fgene.2021.721229. eCollection 2021. Front Genet. 2021. PMID: 34603385 Free PMC article.

3

Deep representation features from DreamDIA^XMBD improve the analysis of data-independent acquisition proteomics.

Gao M, Yang W, Li C, Chang Y, Liu Y, He Q, Zhong CQ, Shuai J, Yu R, Han J. Gao M, et al. Among authors: han j. Commun Biol. 2021 Oct 14;4(1):1190. doi: 10.1038/s42003-021-02726-6. Commun Biol. 2021. PMID: 34650228 Free PMC article.

4

Protocol to estimate cell type proportions from bulk RNA-seq using DAISM-DNN^XMBD.

Lin Y, Wu S, Xiao X, Zhao J, Wang M, Li H, Wang K, Zhang M, Zheng F, Yang W, Zhang L, Han J, Yu R. Lin Y, et al. Among authors: han j. STAR Protoc. 2022 Jul 31;3(3):101587. doi: 10.1016/j.xpro.2022.101587. eCollection 2022 Sep 16. STAR Protoc. 2022. PMID: 35942344 Free PMC article.

5

Chaperone-mediated autophagy prevents apoptosis by degrading BBC3/PUMA.

Xie W, Zhang L, Jiao H, Guan L, Zha J, Li X, Wu M, Wang Z, Han J, You H. Xie W, et al. Among authors: han j. Autophagy. 2015;11(9):1623-35. doi: 10.1080/15548627.2015.1075688. Autophagy. 2015. PMID: 26212789 Free PMC article.

6

GSK3-TIP60-ULK1 signaling pathway links growth factor deprivation to autophagy.

Lin SY, Li TY, Liu Q, Zhang C, Li X, Chen Y, Zhang SM, Lian G, Liu Q, Ruan K, Wang Z, Zhang CS, Chien KY, Wu J, Li Q, Han J, Lin SC. Lin SY, et al. Among authors: han j. Science. 2012 Apr 27;336(6080):477-81. doi: 10.1126/science.1217032. Science. 2012. PMID: 22539723

7

COP1 and GSK3β cooperate to promote c-Jun degradation and inhibit breast cancer cell tumorigenesis.

Shao J, Teng Y, Padia R, Hong S, Noh H, Xie X, Mumm JS, Dong Z, Ding HF, Cowell J, Kim J, Han J, Huang S. Shao J, et al. Among authors: han j. Neoplasia. 2013 Sep;15(9):1075-85. doi: 10.1593/neo.13966. Neoplasia. 2013. PMID: 24027432 Free PMC article.

8

Determinants of public T cell responses.

Li H, Ye C, Ji G, Han J. Li H, et al. Among authors: han j. Cell Res. 2012 Jan;22(1):33-42. doi: 10.1038/cr.2012.1. Epub 2012 Jan 3. Cell Res. 2012. PMID: 22212481 Free PMC article. Review.

9

A unique death pathway keeps RIPK1 D325A mutant mice in check at embryonic day 10.5.

Zhang Y, Huang K, Zhang Y, Han T, Li L, Ruan C, Sun YH, Shi W, Han W, Wu SQ, Song J, Liu J, Han J. Zhang Y, et al. Among authors: han j, han w, han t. PLoS Biol. 2021 Aug 26;19(8):e3001304. doi: 10.1371/journal.pbio.3001304. eCollection 2021 Aug. PLoS Biol. 2021. PMID: 34437534 Free PMC article.

10

MSSort-DIA^XMBD: A deep learning classification tool of the peptide precursors quantified by OpenSWATH.

Li Y, He Q, Guo H, Zhong CQ, Li X, Li Y, Han J, Shuai J. Li Y, et al. Among authors: han j. J Proteomics. 2022 May 15;259:104542. doi: 10.1016/j.jprot.2022.104542. Epub 2022 Feb 26. J Proteomics. 2022. PMID: 35231660 Free article.

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