Hoffmann S - Search Results

1

Synthesizing genome regulation data with vote-counting.

Fischer M, Hoffmann S. Fischer M, et al. Among authors: hoffmann s. Trends Genet. 2022 Dec;38(12):1208-1216. doi: 10.1016/j.tig.2022.06.012. Epub 2022 Jul 8. Trends Genet. 2022. PMID: 35817619 Free article. Review.

2

DREAM and RB cooperate to induce gene repression and cell-cycle arrest in response to p53 activation.

Uxa S, Bernhart SH, Mages CFS, Fischer M, Kohler R, Hoffmann S, Stadler PF, Engeland K, Müller GA. Uxa S, et al. Among authors: hoffmann s. Nucleic Acids Res. 2019 Sep 26;47(17):9087-9103. doi: 10.1093/nar/gkz635. Nucleic Acids Res. 2019. PMID: 31400114 Free PMC article.

3

Dissecting the DNA binding landscape and gene regulatory network of p63 and p53.

Riege K, Kretzmer H, Sahm A, McDade SS, Hoffmann S, Fischer M. Riege K, et al. Among authors: hoffmann s. Elife. 2020 Dec 2;9:e63266. doi: 10.7554/eLife.63266. Elife. 2020. PMID: 33263276 Free PMC article.

4

Transcription factor RFX7 governs a tumor suppressor network in response to p53 and stress.

Coronel L, Riege K, Schwab K, Förste S, Häckes D, Semerau L, Bernhart SH, Siebert R, Hoffmann S, Fischer M. Coronel L, et al. Among authors: hoffmann s. Nucleic Acids Res. 2021 Jul 21;49(13):7437-7456. doi: 10.1093/nar/gkab575. Nucleic Acids Res. 2021. PMID: 34197623 Free PMC article.

5

p53-mediated AKT and mTOR inhibition requires RFX7 and DDIT4 and depends on nutrient abundance.

Coronel L, Häckes D, Schwab K, Riege K, Hoffmann S, Fischer M. Coronel L, et al. Among authors: hoffmann s. Oncogene. 2022 Feb;41(7):1063-1069. doi: 10.1038/s41388-021-02147-z. Epub 2021 Dec 14. Oncogene. 2022. PMID: 34907345 Free PMC article.

6

TargetGeneReg 2.0: a comprehensive web-atlas for p53, p63, and cell cycle-dependent gene regulation.

Fischer M, Schwarz R, Riege K, DeCaprio JA, Hoffmann S. Fischer M, et al. Among authors: hoffmann s. NAR Cancer. 2022 Mar 23;4(1):zcac009. doi: 10.1093/narcan/zcac009. eCollection 2022 Mar. NAR Cancer. 2022. PMID: 35350773 Free PMC article.

7

p53 target ANKRA2 cooperates with RFX7 to regulate tumor suppressor genes.

Schwab K, Riege K, Coronel L, Stanko C, Förste S, Hoffmann S, Fischer M. Schwab K, et al. Among authors: hoffmann s. Cell Death Discov. 2024 Aug 24;10(1):376. doi: 10.1038/s41420-024-02149-2. Cell Death Discov. 2024. PMID: 39181888 Free PMC article.

8

Hydra has mammal-like mutation rates facilitating fast adaptation despite its nonaging phenotype.

Sahm A, Riege K, Groth M, Bens M, Kraus J, Fischer M, Kestler H, Englert C, Schaible R, Platzer M, Hoffmann S. Sahm A, et al. Among authors: hoffmann s. Genome Res. 2024 Dec 23;34(12):2217-2228. doi: 10.1101/gr.279025.124. Genome Res. 2024. PMID: 39632086 Free article.

9

DIEGO: detection of differential alternative splicing using Aitchison's geometry.

Doose G, Bernhart SH, Wagener R, Hoffmann S. Doose G, et al. Among authors: hoffmann s. Bioinformatics. 2018 Mar 15;34(6):1066-1068. doi: 10.1093/bioinformatics/btx690. Bioinformatics. 2018. PMID: 29088309 Free PMC article.

10

Nonlinear DNA methylation trajectories in aging male mice.

Olecka M, van Bömmel A, Best L, Haase M, Foerste S, Riege K, Dost T, Flor S, Witte OW, Franzenburg S, Groth M, von Eyss B, Kaleta C, Frahm C, Hoffmann S. Olecka M, et al. Among authors: hoffmann s. Nat Commun. 2024 Apr 9;15(1):3074. doi: 10.1038/s41467-024-47316-2. Nat Commun. 2024. PMID: 38594255 Free PMC article.

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