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Page 1
Developing tools for analyzing and viewing multiplexed images.
Prabhakaran S, Gatenbee C, Anderson ARA. Prabhakaran S, et al. Patterns (N Y). 2022 Jul 8;3(7):100549. doi: 10.1016/j.patter.2022.100549. eCollection 2022 Jul 8. Patterns (N Y). 2022. PMID: 35845839 Free PMC article.
Dr. Prabhakaran and Dr Gatenbee are research scientists in Anderson's lab and have developed Mistic, a publicly available tool that simultaneously views multiplexed images and assists in gaining biological and clinical insights into patients' data. ...
Dr. Prabhakaran and Dr Gatenbee are research scientists in Anderson's lab and have developed Mistic, a publicly available tool …
IgA-Dominated Humoral Immune Responses Govern Patients' Outcome in Endometrial Cancer.
Mandal G, Biswas S, Anadon CM, Yu X, Gatenbee CD, Prabhakaran S, Payne KK, Chaurio RA, Martin A, Innamarato P, Moran C, Powers JJ, Harro CM, Mine JA, Sprenger KB, Rigolizzo KE, Wang X, Curiel TJ, Rodriguez PC, Anderson AR, Saglam O, Conejo-Garcia JR. Mandal G, et al. Among authors: prabhakaran s. Cancer Res. 2022 Mar 1;82(5):859-871. doi: 10.1158/0008-5472.CAN-21-2376. Cancer Res. 2022. PMID: 34949671 Free PMC article.
Ovarian cancer immunogenicity is governed by a narrow subset of progenitor tissue-resident memory T cells.
Anadon CM, Yu X, Hänggi K, Biswas S, Chaurio RA, Martin A, Payne KK, Mandal G, Innamarato P, Harro CM, Mine JA, Sprenger KB, Cortina C, Powers JJ, Costich TL, Perez BA, Gatenbee CD, Prabhakaran S, Marchion D, Heemskerk MHM, Curiel TJ, Anderson AR, Wenham RM, Rodriguez PC, Conejo-Garcia JR. Anadon CM, et al. Among authors: prabhakaran s. Cancer Cell. 2022 May 9;40(5):545-557.e13. doi: 10.1016/j.ccell.2022.03.008. Epub 2022 Apr 14. Cancer Cell. 2022. PMID: 35427494 Free PMC article.
Mistic: An open-source multiplexed image t-SNE viewer.
Prabhakaran S, Gatenbee C, Robertson-Tessi M, West J, Beg AA, Gray J, Antonia S, Gatenby RA, Anderson ARA. Prabhakaran S, et al. Patterns (N Y). 2022 Jun 2;3(7):100523. doi: 10.1016/j.patter.2022.100523. eCollection 2022 Jul 8. Patterns (N Y). 2022. PMID: 35845830 Free PMC article.
Virtual alignment of pathology image series for multi-gigapixel whole slide images.
Gatenbee CD, Baker AM, Prabhakaran S, Swinyard O, Slebos RJC, Mandal G, Mulholland E, Andor N, Marusyk A, Leedham S, Conejo-Garcia JR, Chung CH, Robertson-Tessi M, Graham TA, Anderson ARA. Gatenbee CD, et al. Among authors: prabhakaran s. Nat Commun. 2023 Jul 26;14(1):4502. doi: 10.1038/s41467-023-40218-9. Nat Commun. 2023. PMID: 37495577 Free PMC article.
Peristromal niches protect lung cancers from targeted therapies through a combined effect of multiple molecular mediators.
Desai B, Miti T, Prabhakaran S, Miroshnychenko D, Henry M, Marusyk V, Gatenbee C, Bui M, Scott J, Altrock PM, Haura E, Anderson ARA, Basanta D, Marusyk A. Desai B, et al. Among authors: prabhakaran s. bioRxiv [Preprint]. 2024 Apr 25:2024.04.24.590626. doi: 10.1101/2024.04.24.590626. bioRxiv. 2024. PMID: 38712093 Free PMC article. Preprint.
Cell identity revealed by precise cell cycle state mapping links data modalities.
Alahmari S, Schultz A, Albrecht J, Tagal V, Siddiqui Z, Prabhakaran S, El Naqa I, Anderson A, Heiser L, Andor N. Alahmari S, et al. Among authors: prabhakaran s. bioRxiv [Preprint]. 2024 Sep 8:2024.09.04.610488. doi: 10.1101/2024.09.04.610488. bioRxiv. 2024. PMID: 39282313 Free PMC article. Preprint.
Interactions between ploidy and resource availability shape clonal interference at initiation and recurrence of glioblastoma.
Nowicka Z, Rentzeperis F, Beck R, Tagal V, Pinto AF, Scanu E, Veith T, Cole J, Ilter D, Viqueira WD, Teer JK, Maksin K, Pasetto S, Abdalah MA, Fiandaca G, Prabhakaran S, Schultz A, Ojwang M, Barnholtz-Sloan JS, Farinhas JM, Gomes AP, Katira P, Andor N. Nowicka Z, et al. Among authors: prabhakaran s. bioRxiv [Preprint]. 2023 Oct 20:2023.10.17.562670. doi: 10.1101/2023.10.17.562670. bioRxiv. 2023. PMID: 37905142 Free PMC article. Preprint.
519 results