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131 results

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Genomic surveillance of Salmonella spp. in the Philippines during 2013-2014.
Lagrada ML, Argimón S, Borlasa JB, Abad JP, Gayeta JM, Masim ML, Olorosa AM, Cohen V, Jeffrey B, Abudahab K, Sia SB, Hufano CM, Stelling J, Holden MTG, Aanensen DM, Carlos CC. Lagrada ML, et al. Among authors: jeffrey b. Trans R Soc Trop Med Hyg. 2022 Dec 2;116(12):1202-1213. doi: 10.1093/trstmh/trac080. Trans R Soc Trop Med Hyg. 2022. PMID: 35999186 Free PMC article.
Integrating whole-genome sequencing within the National Antimicrobial Resistance Surveillance Program in the Philippines.
Argimón S, Masim MAL, Gayeta JM, Lagrada ML, Macaranas PKV, Cohen V, Limas MT, Espiritu HO, Palarca JC, Chilam J, Jamoralin MC Jr, Villamin AS, Borlasa JB, Olorosa AM, Hernandez LFT, Boehme KD, Jeffrey B, Abudahab K, Hufano CM, Sia SB, Stelling J, Holden MTG, Aanensen DM, Carlos CC. Argimón S, et al. Among authors: jeffrey b. Nat Commun. 2020 Jun 1;11(1):2719. doi: 10.1038/s41467-020-16322-5. Nat Commun. 2020. PMID: 32483195 Free PMC article.
Genomic surveillance of methicillin-resistant Staphylococcus aureus in the Philippines, 
2013-2014.
Masim ML, Argimón S, Espiritu HO, Magbanua MA, Lagrada ML, Olorosa AM, Cohen V, Gayeta JM, Jeffrey B, Abudahab K, Hufano CM, Sia SB, Holden MTG, Stelling J, Aanensen DM, Carlos CC; Philippines Antimicrobial Resistance Surveillance Program. Masim ML, et al. Among authors: jeffrey b. Western Pac Surveill Response J. 2021 Feb 26;12(1):6-16. doi: 10.5365/wpsar.2020.11.1.004. eCollection 2021 Jan-Mar. Western Pac Surveill Response J. 2021. PMID: 34094618 Free PMC article.
Genomic surveillance of Neisseria gonorrhoeae in the Philippines, 2013-2014.
Jamoralin MC Jr, Argimón S, Lagrada ML, Villamin AS, Masim ML, Gayeta JM, Boehme KD, Olorosa AM, Sia SB, Hufano CM, Cohen V, Hernandez LT, Jeffrey B, Abudahab K, Stelling J, Holden MTG, Aanensenb DM; e,*; Carlosa CC; Philippines Antimicrobial Resistance Surveillance Program. Jamoralin MC Jr, et al. Among authors: jeffrey b. Western Pac Surveill Response J. 2021 Feb 26;12(1):17-25. doi: 10.5365/wpsar.2020.11.1.005. eCollection 2021 Jan-Mar. Western Pac Surveill Response J. 2021. PMID: 34094619 Free PMC article.
Genomic surveillance of Pseudomonas aeruginosa in the Philippines, 2013-2014.
Chilam J, Argimón S, Limas MT, Masim ML, Gayeta JM, Lagrada ML, Olorosa AM, Cohen V, Hernandez LT, Jeffrey B, Abudahab K, Hufano CM, Sia SB, Holden MTG, Stelling J, Aanensen DM, Carlos CC; Philippines Antimicrobial Resistance Surveillance Program. Chilam J, et al. Among authors: jeffrey b. Western Pac Surveill Response J. 2021 Apr 28;12(2):4-18. doi: 10.5365/wpsar.2020.11.1.006. eCollection 2021 Apr-Jun. Western Pac Surveill Response J. 2021. PMID: 34540307 Free PMC article.
Genomic surveillance of Acinetobacter baumannii in the Philippines, 2013-2014.
Chilam J, Argimón S, Limas MT, Masim ML, Gayeta JM, Lagrada ML, Olorosa AM, Cohen V, Hernandez LT, Jeffrey B, Abudahab K, Hufano CM, Sia SB, Holden MTG, Stelling J, Aanensen DM, Carlos CC; Philippines Antimicrobial Resistance Surveillance Program. Chilam J, et al. Among authors: jeffrey b. Western Pac Surveill Response J. 2021 Oct 27;12(4):1-15. doi: 10.5365/wpsar.2021.12.4.863. eCollection 2021 Oct-Dec. Western Pac Surveill Response J. 2021. PMID: 35251744 Free PMC article.
Lean, mean, learning machines.
Wheeler NE, Sánchez-Busó L, Argimón S, Jeffrey B. Wheeler NE, et al. Among authors: jeffrey b. Nat Rev Microbiol. 2020 May;18(5):266. doi: 10.1038/s41579-020-0357-4. Nat Rev Microbiol. 2020. PMID: 32203299 No abstract available.
Reduction in mobility and COVID-19 transmission.
Nouvellet P, Bhatia S, Cori A, Ainslie KEC, Baguelin M, Bhatt S, Boonyasiri A, Brazeau NF, Cattarino L, Cooper LV, Coupland H, Cucunuba ZM, Cuomo-Dannenburg G, Dighe A, Djaafara BA, Dorigatti I, Eales OD, van Elsland SL, Nascimento FF, FitzJohn RG, Gaythorpe KAM, Geidelberg L, Green WD, Hamlet A, Hauck K, Hinsley W, Imai N, Jeffrey B, Knock E, Laydon DJ, Lees JA, Mangal T, Mellan TA, Nedjati-Gilani G, Parag KV, Pons-Salort M, Ragonnet-Cronin M, Riley S, Unwin HJT, Verity R, Vollmer MAC, Volz E, Walker PGT, Walters CE, Wang H, Watson OJ, Whittaker C, Whittles LK, Xi X, Ferguson NM, Donnelly CA. Nouvellet P, et al. Among authors: jeffrey b. Nat Commun. 2021 Feb 17;12(1):1090. doi: 10.1038/s41467-021-21358-2. Nat Commun. 2021. PMID: 33597546 Free PMC article.
Estimating the effects of non-pharmaceutical interventions on COVID-19 in Europe.
Flaxman S, Mishra S, Gandy A, Unwin HJT, Mellan TA, Coupland H, Whittaker C, Zhu H, Berah T, Eaton JW, Monod M; Imperial College COVID-19 Response Team; Ghani AC, Donnelly CA, Riley S, Vollmer MAC, Ferguson NM, Okell LC, Bhatt S. Flaxman S, et al. Nature. 2020 Aug;584(7820):257-261. doi: 10.1038/s41586-020-2405-7. Epub 2020 Jun 8. Nature. 2020. PMID: 32512579
State-level tracking of COVID-19 in the United States.
Unwin HJT, Mishra S, Bradley VC, Gandy A, Mellan TA, Coupland H, Ish-Horowicz J, Vollmer MAC, Whittaker C, Filippi SL, Xi X, Monod M, Ratmann O, Hutchinson M, Valka F, Zhu H, Hawryluk I, Milton P, Ainslie KEC, Baguelin M, Boonyasiri A, Brazeau NF, Cattarino L, Cucunuba Z, Cuomo-Dannenburg G, Dorigatti I, Eales OD, Eaton JW, van Elsland SL, FitzJohn RG, Gaythorpe KAM, Green W, Hinsley W, Jeffrey B, Knock E, Laydon DJ, Lees J, Nedjati-Gilani G, Nouvellet P, Okell L, Parag KV, Siveroni I, Thompson HA, Walker P, Walters CE, Watson OJ, Whittles LK, Ghani AC, Ferguson NM, Riley S, Donnelly CA, Bhatt S, Flaxman S. Unwin HJT, et al. Among authors: jeffrey b. Nat Commun. 2020 Dec 3;11(1):6189. doi: 10.1038/s41467-020-19652-6. Nat Commun. 2020. PMID: 33273462 Free PMC article.
131 results