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Evaluation and validation of an RT-PCR assay for specific detection of monkeypox virus (MPXV).
Paniz-Mondolfi A, Guerra S, Muñoz M, Luna N, Hernandez MM, Patino LH, Reidy J, Banu R, Shrestha P, Liggayu B, Umeaku A, Chen F, Cao L, Patel A, Hanna A, Li S, Look A, Pagani N, Albrecht R, Pearl R, Garcia-Sastre A, Bogunovic D, Palacios G, Bonnier L, Cera F, Lopez H, Calderon Y, Eiting E, Mullen K, Shin SJ, Lugo LA, Urbina AE, Starks C, Koo T, Uychiat P, Look A, van Bakel H, Gonzalez-Reiche A, Betancourt AF, Reich D, Cordon-Cardo C, Simon V, Sordillo EM, Ramírez JD. Paniz-Mondolfi A, et al. Among authors: shrestha p. J Med Virol. 2023 Jan;95(1):e28247. doi: 10.1002/jmv.28247. Epub 2022 Nov 1. J Med Virol. 2023. PMID: 36271493
RT-PCR/MALDI-TOF mass spectrometry-based detection of SARS-CoV-2 in saliva specimens.
Hernandez MM, Banu R, Shrestha P, Patel A, Chen F, Cao L, Fabre S, Tan J, Lopez H, Chiu N, Shifrin B, Zapolskaya I, Flores V, Lee PY, Castañeda S, Ramírez JD, Jhang J, Osorio G, Gitman MR, Nowak MD, Reich DL, Cordon-Cardo C, Sordillo EM, Paniz-Mondolfi AE. Hernandez MM, et al. Among authors: shrestha p. J Med Virol. 2021 Sep;93(9):5481-5486. doi: 10.1002/jmv.27069. Epub 2021 May 19. J Med Virol. 2021. PMID: 33963565 Free PMC article.
Robust clinical detection of SARS-CoV-2 variants by RT-PCR/MALDI-TOF multitarget approach.
Hernandez MM, Banu R, Gonzalez-Reiche AS, van de Guchte A, Khan Z, Shrestha P, Cao L, Chen F, Shi H, Hanna A, Alshammary H, Fabre S, Amoako A, Obla A, Alburquerque B, Patiño LH, Ramírez JD, Sebra R, Gitman MR, Nowak MD, Cordon-Cardo C, Schutzbank TE, Simon V, van Bakel H, Sordillo EM, Paniz-Mondolfi AE. Hernandez MM, et al. Among authors: shrestha p. J Med Virol. 2022 Apr;94(4):1606-1616. doi: 10.1002/jmv.27510. Epub 2021 Dec 16. J Med Virol. 2022. PMID: 34877674 Free PMC article.
Food for thought: Eating before saliva collection and interference with SARS-CoV-2 detection.
Hernandez MM, Riollano-Cruz M, Boyle MC, Banu R, Shrestha P, Gray B, Cao L, Chen F, Shi H, Paniz-Perez DE, Paniz-Perez PA, Rishi AL, Dubinsky J, Dubinsky D, Dubinsky O, Baine S, Baine L, Arinsburg S, Baine I, Ramirez JD, Cordon-Cardo C, Sordillo EM, Paniz-Mondolfi AE. Hernandez MM, et al. Among authors: shrestha p. J Med Virol. 2022 Jun;94(6):2471-2478. doi: 10.1002/jmv.27660. Epub 2022 Feb 23. J Med Virol. 2022. PMID: 35171508 Free PMC article.
Hotspots for SARS-CoV-2 Omicron variant spread: Lessons from New York City.
Ramírez JD, Castañeda S, Ballesteros N, Muñoz M, Hernández M, Banu R, Shrestha P, Chen F, Shi H; PSP Study Group; van Bakel H, Simon V, Cordon-Cardo C, Sordillo EM, Paniz-Mondolfi AE. Ramírez JD, et al. Among authors: shrestha p. J Med Virol. 2022 Jul;94(7):2911-2914. doi: 10.1002/jmv.27691. Epub 2022 Mar 14. J Med Virol. 2022. PMID: 35243662 Free PMC article.
RT-PCR/MALDI-TOF Diagnostic Target Performance Reflects Circulating SARS-CoV-2 Variant Diversity in New York City.
Hernandez MM, Banu R, Gonzalez-Reiche AS, Gray B, Shrestha P, Cao L, Chen F, Shi H, Hanna A, Ramírez JD, van de Guchte A, Sebra R, Gitman MR, Nowak MD, Cordon-Cardo C, Schutzbank TE, Simon V, van Bakel H, Sordillo EM, Paniz-Mondolfi AE; Mount Sinai PSP Study Group. Hernandez MM, et al. Among authors: shrestha p. J Mol Diagn. 2022 Jul;24(7):738-749. doi: 10.1016/j.jmoldx.2022.04.003. Epub 2022 May 4. J Mol Diagn. 2022. PMID: 35525388 Free PMC article.
Pan-stage real-time PCR for quantitation of Trypanosoma cruzi parasitic loads in blood samples.
Ramírez JD, Cao L, Cruz-Saavedra L, Hernandez C, Castañeda S, Muñoz M, Ballesteros N, Banu R, Shrestha P, Cordon-Cardo C, Sordillo EM, Paniz-Mondolfi A. Ramírez JD, et al. Among authors: shrestha p. Int J Infect Dis. 2022 Sep;122:310-312. doi: 10.1016/j.ijid.2022.06.006. Epub 2022 Jun 9. Int J Infect Dis. 2022. PMID: 35690365 Free article.
A Robust, Highly Multiplexed Mass Spectrometry Assay to Identify SARS-CoV-2 Variants.
Hernandez MM, Banu R, Shrestha P, Gonzalez-Reiche AS, van de Guchte A, Farrugia K, Sebra R; Mount Sinai PSP Study Group; Gitman MR, Nowak MD, Cordon-Cardo C, Simon V, van Bakel H, Sordillo EM, Luna N, Ramirez A, Castañeda SA, Patiño LH, Ballesteros N, Muñoz M, Ramírez JD, Paniz-Mondolfi AE. Hernandez MM, et al. Among authors: shrestha p. Microbiol Spectr. 2022 Oct 26;10(5):e0173622. doi: 10.1128/spectrum.01736-22. Epub 2022 Sep 7. Microbiol Spectr. 2022. PMID: 36069609 Free PMC article.
Phylogenetic landscape of Monkeypox Virus (MPV) during the early outbreak in New York City, 2022.
Patiño LH, Guerra S, Muñoz M, Luna N, Farrugia K, van de Guchte A, Khalil Z, Gonzalez-Reiche AS, Hernandez MM, Banu R, Shrestha P, Liggayu B, Firpo Betancourt A, Reich D, Cordon-Cardo C, Albrecht R, Pearl R, Simon V, Rooker A, Sordillo EM, van Bakel H, García-Sastre A, Bogunovic D, Palacios G, Paniz Mondolfi A, Ramírez JD. Patiño LH, et al. Among authors: shrestha p. Emerg Microbes Infect. 2023 Dec;12(1):e2192830. doi: 10.1080/22221751.2023.2192830. Emerg Microbes Infect. 2023. PMID: 36927408 Free PMC article.
Sequential intrahost evolution and onward transmission of SARS-CoV-2 variants.
Gonzalez-Reiche AS, Alshammary H, Schaefer S, Patel G, Polanco J, Carreño JM, Amoako AA, Rooker A, Cognigni C, Floda D, van de Guchte A, Khalil Z, Farrugia K, Assad N, Zhang J, Alburquerque B; PARIS/PSP study group; Sominsky LA, Gleason C, Srivastava K, Sebra R, Ramirez JD, Banu R, Shrestha P, Krammer F, Paniz-Mondolfi A, Sordillo EM, Simon V, van Bakel H. Gonzalez-Reiche AS, et al. Among authors: shrestha p. Nat Commun. 2023 Jun 3;14(1):3235. doi: 10.1038/s41467-023-38867-x. Nat Commun. 2023. PMID: 37270625 Free PMC article.
1,036 results