Haase SB - Search Results

1

Highly-automated, high-throughput replication of yeast-based logic circuit design assessments.

Goldman RP, Moseley R, Roehner N, Cummins B, Vrana JD, Clowers KJ, Bryce D, Beal J, DeHaven M, Nowak J, Higa T, Biggers V, Lee P, Hunt JP, Mosqueda L, Haase SB, Weston M, Zheng G, Deckard A, Gopaulakrishnan S, Stubbs JF, Gaffney NI, Vaughn MW, Maheshri N, Mikhalev E, Bartley B, Markeloff R, Mitchell T, Nguyen T, Sumorok D, Walczak N, Myers C, Zundel Z, Hatch B, Scholz J, Colonna-Romano J. Goldman RP, et al. Among authors: haase sb. Synth Biol (Oxf). 2022 Oct 6;7(1):ysac018. doi: 10.1093/synbio/ysac018. eCollection 2022. Synth Biol (Oxf). 2022. PMID: 36285185 Free PMC article.

2

Design and analysis of large-scale biological rhythm studies: a comparison of algorithms for detecting periodic signals in biological data.

Deckard A, Anafi RC, Hogenesch JB, Haase SB, Harer J. Deckard A, et al. Among authors: haase sb. Bioinformatics. 2013 Dec 15;29(24):3174-80. doi: 10.1093/bioinformatics/btt541. Epub 2013 Sep 20. Bioinformatics. 2013. PMID: 24058056 Free PMC article.

3

SW1PerS: Sliding windows and 1-persistence scoring; discovering periodicity in gene expression time series data.

Perea JA, Deckard A, Haase SB, Harer J. Perea JA, et al. Among authors: haase sb. BMC Bioinformatics. 2015 Aug 16;16:257. doi: 10.1186/s12859-015-0645-6. BMC Bioinformatics. 2015. PMID: 26277424 Free PMC article.

4

Reconciling conflicting models for global control of cell-cycle transcription.

Cho CY, Motta FC, Kelliher CM, Deckard A, Haase SB. Cho CY, et al. Among authors: haase sb. Cell Cycle. 2017 Oct 18;16(20):1965-1978. doi: 10.1080/15384101.2017.1367073. Epub 2017 Sep 21. Cell Cycle. 2017. PMID: 28934013 Free PMC article.

5

Layers of regulation of cell-cycle gene expression in the budding yeast Saccharomyces cerevisiae.

Kelliher CM, Foster MW, Motta FC, Deckard A, Soderblom EJ, Moseley MA, Haase SB. Kelliher CM, et al. Among authors: haase sb. Mol Biol Cell. 2018 Nov 1;29(22):2644-2655. doi: 10.1091/mbc.E18-04-0255. Epub 2018 Sep 12. Mol Biol Cell. 2018. PMID: 30207828 Free PMC article.

6

Inference of Gene Regulatory Network Uncovers the Linkage between Circadian Clock and Crassulacean Acid Metabolism in Kalanchoë fedtschenkoi.

Moseley RC, Motta F, Tuskan GA, Haase SB, Yang X. Moseley RC, et al. Among authors: haase sb. Cells. 2021 Aug 27;10(9):2217. doi: 10.3390/cells10092217. Cells. 2021. PMID: 34571864 Free PMC article.

7

Inherent Dynamics Visualizer, an Interactive Application for Evaluating and Visualizing Outputs from a Gene Regulatory Network Inference Pipeline.

Moseley RC, Campione S, Cummins B, Motta F, Haase SB. Moseley RC, et al. Among authors: haase sb. J Vis Exp. 2021 Dec 7;(178):10.3791/63084. doi: 10.3791/63084. J Vis Exp. 2021. PMID: 34958073 Free PMC article.

8

Round Trip: An Automated Pipeline for Experimental Design, Execution, and Analysis.

Bryce D, Goldman RP, DeHaven M, Beal J, Bartley B, Nguyen TT, Walczak N, Weston M, Zheng G, Nowak J, Lee P, Stubbs J, Gaffney N, Vaughn MW, Myers CJ, Moseley RC, Haase S, Deckard A, Cummins B, Leiby N. Bryce D, et al. ACS Synth Biol. 2022 Feb 18;11(2):608-622. doi: 10.1021/acssynbio.1c00305. Epub 2022 Jan 31. ACS Synth Biol. 2022. PMID: 35099189

9

Conservation of dynamic characteristics of transcriptional regulatory elements in periodic biological processes.

Motta FC, Moseley RC, Cummins B, Deckard A, Haase SB. Motta FC, et al. Among authors: haase sb. BMC Bioinformatics. 2022 Mar 17;23(1):94. doi: 10.1186/s12859-022-04627-9. BMC Bioinformatics. 2022. PMID: 35300586 Free PMC article.

10

Experimental guidance for discovering genetic networks through hypothesis reduction on time series.

Cummins B, Motta FC, Moseley RC, Deckard A, Campione S, Gameiro M, Gedeon T, Mischaikow K, Haase SB. Cummins B, et al. Among authors: haase sb. PLoS Comput Biol. 2022 Oct 10;18(10):e1010145. doi: 10.1371/journal.pcbi.1010145. eCollection 2022 Oct. PLoS Comput Biol. 2022. PMID: 36215333 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My Custom Filters

Publication date

Text availability

Article attribute

Article type

Article Language

Species

Sex

Age

Other

61 results

Search Page

Filters