Zhang J - Search Results

1

Venus: An efficient virus infection detection and fusion site discovery method using single-cell and bulk RNA-seq data.

Lee CY, Chen Y, Duan Z, Xu M, Girgenti MJ, Xu K, Gerstein M, Zhang J. Lee CY, et al. Among authors: zhang j. PLoS Comput Biol. 2022 Oct 27;18(10):e1010636. doi: 10.1371/journal.pcbi.1010636. eCollection 2022 Oct. PLoS Comput Biol. 2022. PMID: 36301997 Free PMC article.

2

AttPNet: Attention-Based Deep Neural Network for 3D Point Set Analysis.

Yang Y, Ma Y, Zhang J, Gao X, Xu M. Yang Y, et al. Among authors: zhang j. Sensors (Basel). 2020 Sep 23;20(19):5455. doi: 10.3390/s20195455. Sensors (Basel). 2020. PMID: 32977508 Free PMC article.

3

Few-shot learning for classification of novel macromolecular structures in cryo-electron tomograms.

Li R, Yu L, Zhou B, Zeng X, Wang Z, Yang X, Zhang J, Gao X, Jiang R, Xu M. Li R, et al. Among authors: zhang j. PLoS Comput Biol. 2020 Nov 11;16(11):e1008227. doi: 10.1371/journal.pcbi.1008227. eCollection 2020 Nov. PLoS Comput Biol. 2020. PMID: 33175839 Free PMC article.

4

Transcriptomics of the depressed and PTSD brain.

Zhang J, Kaye AP, Wang J, Girgenti MJ. Zhang J, et al. Neurobiol Stress. 2021 Oct 11;15:100408. doi: 10.1016/j.ynstr.2021.100408. eCollection 2021 Nov. Neurobiol Stress. 2021. PMID: 34703849 Free PMC article.

5

InsuLock: A Weakly Supervised Learning Approach for Accurate Insulator Prediction, and Variant Impact Quantification.

Srinivasan SS, Gong Y, Xu S, Hwang A, Xu M, Girgenti MJ, Zhang J. Srinivasan SS, et al. Among authors: zhang j. Genes (Basel). 2022 Mar 30;13(4):621. doi: 10.3390/genes13040621. Genes (Basel). 2022. PMID: 35456427 Free PMC article.

6

Translator: A Transfer Learning Approach to Facilitate Single-Cell ATAC-Seq Data Analysis from Reference Dataset.

Xu S, Skarica M, Hwang A, Dai Y, Lee C, Girgenti MJ, Zhang J. Xu S, et al. Among authors: zhang j. J Comput Biol. 2022 Jul;29(7):619-633. doi: 10.1089/cmb.2021.0596. Epub 2022 May 17. J Comput Biol. 2022. PMID: 35584295 Free PMC article.

7

Structure Detection in Three-Dimensional Cellular Cryoelectron Tomograms by Reconstructing Two-Dimensional Annotated Tilt Series.

Zeng X, Lin Z, Uddin MR, Zhou B, Cheng C, Zhang J, Freyberg Z, Xu M. Zeng X, et al. Among authors: zhang j. J Comput Biol. 2022 Aug;29(8):932-941. doi: 10.1089/cmb.2021.0606. Epub 2022 Jul 21. J Comput Biol. 2022. PMID: 35862434 Free PMC article.

8

DeepVelo: Single-cell transcriptomic deep velocity field learning with neural ordinary differential equations.

Chen Z, King WC, Hwang A, Gerstein M, Zhang J. Chen Z, et al. Among authors: zhang j. Sci Adv. 2022 Dec 2;8(48):eabq3745. doi: 10.1126/sciadv.abq3745. Epub 2022 Nov 30. Sci Adv. 2022. PMID: 36449617 Free PMC article.

9

DEEP ACTIVE LEARNING FOR CRYO-ELECTRON TOMOGRAPHY CLASSIFICATION.

Wang T, Li B, Zhang J, Zeng X, Uddin MR, Wu W, Xu M. Wang T, et al. Among authors: zhang j. Proc Int Conf Image Proc. 2022 Oct;2022:1611-1615. doi: 10.1109/icip46576.2022.9898002. Epub 2022 Oct 18. Proc Int Conf Image Proc. 2022. PMID: 37021115 Free PMC article.

10

iHerd: an integrative hierarchical graph representation learning framework to quantify network changes and prioritize risk genes in disease.

Duan Z, Dai Y, Hwang A, Lee C, Xie K, Xiao C, Xu M, Girgenti MJ, Zhang J. Duan Z, et al. Among authors: zhang j. PLoS Comput Biol. 2023 Sep 11;19(9):e1011444. doi: 10.1371/journal.pcbi.1011444. eCollection 2023 Sep. PLoS Comput Biol. 2023. PMID: 37695793 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My Custom Filters

Publication date

Text availability

Article attribute

Article type

Article Language

Species

Sex

Age

Other

178,604 results

Search Page

Filters