Jia C - Search Results

1

Clarion is a multi-label problem transformation method for identifying mRNA subcellular localizations.

Bi Y, Li F, Guo X, Wang Z, Pan T, Guo Y, Webb GI, Yao J, Jia C, Song J. Bi Y, et al. Among authors: jia c. Brief Bioinform. 2022 Nov 19;23(6):bbac467. doi: 10.1093/bib/bbac467. Brief Bioinform. 2022. PMID: 36341591 Free PMC article.

2

O-GlcNAcPRED-II: an integrated classification algorithm for identifying O-GlcNAcylation sites based on fuzzy undersampling and a K-means PCA oversampling technique.

Jia C, Zuo Y, Zou Q. Jia C, et al. Bioinformatics. 2018 Jun 15;34(12):2029-2036. doi: 10.1093/bioinformatics/bty039. Bioinformatics. 2018. PMID: 29420699

3

4mCPred: machine learning methods for DNA N4-methylcytosine sites prediction.

He W, Jia C, Zou Q. He W, et al. Among authors: jia c. Bioinformatics. 2019 Feb 15;35(4):593-601. doi: 10.1093/bioinformatics/bty668. Bioinformatics. 2019. PMID: 30052767

4

MULTiPly: a novel multi-layer predictor for discovering general and specific types of promoters.

Zhang M, Li F, Marquez-Lago TT, Leier A, Fan C, Kwoh CK, Chou KC, Song J, Jia C. Zhang M, et al. Among authors: jia c. Bioinformatics. 2019 Sep 1;35(17):2957-2965. doi: 10.1093/bioinformatics/btz016. Bioinformatics. 2019. PMID: 30649179 Free PMC article.

5

PRISMOID: a comprehensive 3D structure database for post-translational modifications and mutations with functional impact.

Li F, Fan C, Marquez-Lago TT, Leier A, Revote J, Jia C, Zhu Y, Smith AI, Webb GI, Liu Q, Wei L, Li J, Song J. Li F, et al. Among authors: jia c. Brief Bioinform. 2020 May 21;21(3):1069-1079. doi: 10.1093/bib/bbz050. Brief Bioinform. 2020. PMID: 31161204 Free PMC article.

6

Formator: Predicting Lysine Formylation Sites Based on the Most Distant Undersampling and Safe-Level Synthetic Minority Oversampling.

Jia C, Zhang M, Fan C, Li F, Song J. Jia C, et al. IEEE/ACM Trans Comput Biol Bioinform. 2021 Sep-Oct;18(5):1937-1945. doi: 10.1109/TCBB.2019.2957758. Epub 2021 Oct 7. IEEE/ACM Trans Comput Biol Bioinform. 2021. PMID: 31804942

7

Inspector: a lysine succinylation predictor based on edited nearest-neighbor undersampling and adaptive synthetic oversampling.

Zhu Y, Jia C, Li F, Song J. Zhu Y, et al. Among authors: jia c. Anal Biochem. 2020 Mar 15;593:113592. doi: 10.1016/j.ab.2020.113592. Epub 2020 Jan 20. Anal Biochem. 2020. PMID: 31968210

8

DeepCPP: a deep neural network based on nucleotide bias information and minimum distribution similarity feature selection for RNA coding potential prediction.

Zhang Y, Jia C, Fullwood MJ, Kwoh CK. Zhang Y, et al. Among authors: jia c. Brief Bioinform. 2021 Mar 22;22(2):2073-2084. doi: 10.1093/bib/bbaa039. Brief Bioinform. 2021. PMID: 32227075

9

Pippin: A random forest-based method for identifying presynaptic and postsynaptic neurotoxins.

Li P, Zhang H, Zhao X, Jia C, Li F, Song J. Li P, et al. Among authors: jia c. J Bioinform Comput Biol. 2020 Apr;18(2):2050008. doi: 10.1142/S0219720020500080. Epub 2020 May 5. J Bioinform Comput Biol. 2020. PMID: 32372714

10

PASSION: an ensemble neural network approach for identifying the binding sites of RBPs on circRNAs.

Jia C, Bi Y, Chen J, Leier A, Li F, Song J. Jia C, et al. Bioinformatics. 2020 Aug 1;36(15):4276-4282. doi: 10.1093/bioinformatics/btaa522. Bioinformatics. 2020. PMID: 32426818

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