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RAIChU: automating the visualisation of natural product biosynthesis.
J Cheminform. 2024 Sep 3;16(1):106. doi: 10.1186/s13321-024-00898-x.
J Cheminform. 2024.
PMID: 39227914
Free PMC article.
MIBiG 3.0: a community-driven effort to annotate experimentally validated biosynthetic gene clusters.
Terlouw BR, Blin K, Navarro-Muñoz JC, Avalon NE, Chevrette MG, Egbert S, Lee S, Meijer D, Recchia MJJ, Reitz ZL, van Santen JA, Selem-Mojica N, Tørring T, Zaroubi L, Alanjary M, Aleti G, Aguilar C, Al-Salihi SAA, Augustijn HE, Avelar-Rivas JA, Avitia-Domínguez LA, Barona-Gómez F, Bernaldo-Agüero J, Bielinski VA, Biermann F, Booth TJ, Carrion Bravo VJ, Castelo-Branco R, Chagas FO, Cruz-Morales P, Du C, Duncan KR, Gavriilidou A, Gayrard D, Gutiérrez-García K, Haslinger K, Helfrich EJN, van der Hooft JJJ, Jati AP, Kalkreuter E, Kalyvas N, Kang KB, Kautsar S, Kim W, Kunjapur AM, Li YX, Lin GM, Loureiro C, Louwen JJR, Louwen NLL, Lund G, Parra J, Philmus B, Pourmohsenin B, Pronk LJU, Rego A, Rex DAB, Robinson S, Rosas-Becerra LR, Roxborough ET, Schorn MA, Scobie DJ, Singh KS, Sokolova N, Tang X, Udwary D, Vigneshwari A, Vind K, Vromans SPJM, Waschulin V, Williams SE, Winter JM, Witte TE, Xie H, Yang D, Yu J, Zdouc M, Zhong Z, Collemare J, Linington RG, Weber T, Medema MH.
Terlouw BR, et al. Among authors: vromans spjm.
Nucleic Acids Res. 2023 Jan 6;51(D1):D603-D610. doi: 10.1093/nar/gkac1049.
Nucleic Acids Res. 2023.
PMID: 36399496
Free PMC article.
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PIKAChU: a Python-based informatics kit for analysing chemical units.
Terlouw BR, Vromans SPJM, Medema MH.
Terlouw BR, et al. Among authors: vromans spjm.
J Cheminform. 2022 Jun 7;14(1):34. doi: 10.1186/s13321-022-00616-5.
J Cheminform. 2022.
PMID: 35672769
Free PMC article.
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Virus infection modulates male sexual behaviour in Caenorhabditis elegans.
van Sluijs L, Liu J, Schrama M, van Hamond S, Vromans SPJM, Scholten MH, Žibrat N, Riksen JAG, Pijlman GP, Sterken MG, Kammenga JE.
van Sluijs L, et al. Among authors: vromans spjm.
Mol Ecol. 2021 Dec;30(24):6776-6790. doi: 10.1111/mec.16179. Epub 2021 Sep 29.
Mol Ecol. 2021.
PMID: 34534386
Free PMC article.
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