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Trends in Risk Factors and Symptoms Associated With SARS-CoV-2 and Rhinovirus Test Positivity in King County, Washington, June 2020 to July 2022.
Hansen C, Perofsky AC, Burstein R, Famulare M, Boyle S, Prentice R, Marshall C, McCormick BJJ, Reinhart D, Capodanno B, Truong M, Schwabe-Fry K, Kuchta K, Pfau B, Acker Z, Lee J, Sibley TR, McDermot E, Rodriguez-Salas L, Stone J, Gamboa L, Han PD, Duchin JS, Waghmare A, Englund JA, Shendure J, Bedford T, Chu HY, Starita LM, Viboud C. Hansen C, et al. Among authors: shendure j. JAMA Netw Open. 2022 Dec 1;5(12):e2245861. doi: 10.1001/jamanetworkopen.2022.45861. JAMA Netw Open. 2022. PMID: 36484987 Free PMC article.
Cryptic transmission of SARS-CoV-2 in Washington state.
Bedford T, Greninger AL, Roychoudhury P, Starita LM, Famulare M, Huang ML, Nalla A, Pepper G, Reinhardt A, Xie H, Shrestha L, Nguyen TN, Adler A, Brandstetter E, Cho S, Giroux D, Han PD, Fay K, Frazar CD, Ilcisin M, Lacombe K, Lee J, Kiavand A, Richardson M, Sibley TR, Truong M, Wolf CR, Nickerson DA, Rieder MJ, Englund JA; Seattle Flu Study Investigators; Hadfield J, Hodcroft EB, Huddleston J, Moncla LH, Müller NF, Neher RA, Deng X, Gu W, Federman S, Chiu C, Duchin JS, Gautom R, Melly G, Hiatt B, Dykema P, Lindquist S, Queen K, Tao Y, Uehara A, Tong S, MacCannell D, Armstrong GL, Baird GS, Chu HY, Shendure J, Jerome KR. Bedford T, et al. Among authors: shendure j. Science. 2020 Oct 30;370(6516):571-575. doi: 10.1126/science.abc0523. Epub 2020 Sep 10. Science. 2020. PMID: 32913002 Free PMC article.
Results from a test-and-treat study for influenza among residents of homeless shelters in King County, WA: A stepped-wedge cluster-randomized trial.
Rogers JH, Casto AM, Nwanne G, Link AC, Martinez MA, Nackviseth C, Wolf CR, Hughes JP, Englund JA, Sugg N, Uyeki TM, Han PD, Pfau B, Shendure J, Chu HY. Rogers JH, et al. Among authors: shendure j. Influenza Other Respir Viruses. 2023 Jan;17(1):e13092. doi: 10.1111/irv.13092. Epub 2023 Jan 7. Influenza Other Respir Viruses. 2023. PMID: 36610058 Free PMC article. Clinical Trial.
Streptococcus pneumoniae nasal carriage patterns with and without common respiratory virus detections in households in Seattle, WA, USA before and during the COVID-19 pandemic.
Bennett JC, Emanuels A, Heimonen J, O'Hanlon J, Hughes JP, Han PD, Chow EJ, Ogokeh CE, Rolfes MA, Lockwood CM, Pfau B, Uyeki TM, Shendure J, Hoag S, Fay K, Lee J, Sibley TR, Rogers JH, Starita LM, Englund JA, Chu HY. Bennett JC, et al. Among authors: shendure j. Front Pediatr. 2023 Jul 7;11:1198278. doi: 10.3389/fped.2023.1198278. eCollection 2023. Front Pediatr. 2023. PMID: 37484765 Free PMC article.
How to build the virtual cell with artificial intelligence: Priorities and opportunities.
Bunne C, Roohani Y, Rosen Y, Gupta A, Zhang X, Roed M, Alexandrov T, AlQuraishi M, Brennan P, Burkhardt DB, Califano A, Cool J, Dernburg AF, Ewing K, Fox EB, Haury M, Herr AE, Horvitz E, Hsu PD, Jain V, Johnson GR, Kalil T, Kelley DR, Kelley SO, Kreshuk A, Mitchison T, Otte S, Shendure J, Sofroniew NJ, Theis F, Theodoris CV, Upadhyayula S, Valer M, Wang B, Xing E, Yeung-Levy S, Zitnik M, Karaletsos T, Regev A, Lundberg E, Leskovec J, Quake SR. Bunne C, et al. Among authors: shendure j. Cell. 2024 Dec 12;187(25):7045-7063. doi: 10.1016/j.cell.2024.11.015. Cell. 2024. PMID: 39672099 Free article. Review.
The lives of cells, recorded.
Askary A, Chen W, Choi J, Du LY, Elowitz MB, Gagnon JA, Schier AF, Seidel S, Shendure J, Stadler T, Tran M. Askary A, et al. Among authors: shendure j. Nat Rev Genet. 2024 Nov 25. doi: 10.1038/s41576-024-00788-w. Online ahead of print. Nat Rev Genet. 2024. PMID: 39587306 Review.
Clinical and Genomic Epidemiology of Coxsackievirus A21 and Enterovirus D68 in Homeless Shelters, King County, Washington, USA, 2019-2021.
Cox SN, Casto AM, Franko NM, Chow EJ, Han PD, Gamboa L, Pfau B, Xie H, Kong K, Sereewit J, Rolfes MA, Mosites E, Uyeki TM, Greninger AL, Carone M, Shim MM, Bedford T, Shendure J, Boeckh M, Englund JA, Starita LM, Roychoudhury P, Chu HY. Cox SN, et al. Among authors: shendure j. Emerg Infect Dis. 2024 Nov;30(11):2250-2260. doi: 10.3201/eid3011.240687. Emerg Infect Dis. 2024. PMID: 39447143 Free PMC article.
Linking candidate causal autoimmune variants to T cell networks using genetic and epigenetic screens in primary human T cells.
Ho CH, Dippel MA, McQuade MS, Mishra A, Pribitzer S, Nguyen LP, Hardy S, Chandok H, Chardon F, McDiarmid TA, DeBerg HA, Buckner JH, Shendure J, de Boer CG, Guo MH, Tewhey R, Ray JP. Ho CH, et al. Among authors: shendure j. bioRxiv [Preprint]. 2024 Oct 11:2024.10.07.617092. doi: 10.1101/2024.10.07.617092. bioRxiv. 2024. PMID: 39416200 Free PMC article. Preprint.
How to Build the Virtual Cell with Artificial Intelligence: Priorities and Opportunities.
Bunne C, Roohani Y, Rosen Y, Gupta A, Zhang X, Roed M, Alexandrov T, AlQuraishi M, Brennan P, Burkhardt DB, Califano A, Cool J, Dernburg AF, Ewing K, Fox EB, Haury M, Herr AE, Horvitz E, Hsu PD, Jain V, Johnson GR, Kalil T, Kelley DR, Kelley SO, Kreshuk A, Mitchison T, Otte S, Shendure J, Sofroniew NJ, Theis F, Theodoris CV, Upadhyayula S, Valer M, Wang B, Xing E, Yeung-Levy S, Zitnik M, Karaletsos T, Regev A, Lundberg E, Leskovec J, Quake SR. Bunne C, et al. Among authors: shendure j. ArXiv [Preprint]. 2024 Oct 14:arXiv:2409.11654v2. ArXiv. 2024. Update in: Cell. 2024 Dec 12;187(25):7045-7063. doi: 10.1016/j.cell.2024.11.015 PMID: 39398201 Free PMC article. Updated. Preprint.
447 results