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Page 1
First chromosome scale genomes of ithomiine butterflies (Nymphalidae: Ithomiini): Comparative models for mimicry genetic studies.
Gauthier J, Meier J, Legeai F, McClure M, Whibley A, Bretaudeau A, Boulain H, Parrinello H, Mugford ST, Durbin R, Zhou C, McCarthy S, Wheat CW, Piron-Prunier F, Monsempes C, François MC, Jay P, Noûs C, Persyn E, Jacquin-Joly E, Meslin C, Montagné N, Lemaitre C, Elias M. Gauthier J, et al. Among authors: durbin r. Mol Ecol Resour. 2023 May;23(4):872-885. doi: 10.1111/1755-0998.13749. Epub 2023 Jan 27. Mol Ecol Resour. 2023. PMID: 36533297 Free article.
YaHS: yet another Hi-C scaffolding tool.
Zhou C, McCarthy SA, Durbin R. Zhou C, et al. Among authors: durbin r. Bioinformatics. 2023 Jan 1;39(1):btac808. doi: 10.1093/bioinformatics/btac808. Bioinformatics. 2023. PMID: 36525368 Free PMC article.
MitoHiFi: a python pipeline for mitochondrial genome assembly from PacBio high fidelity reads.
Uliano-Silva M, Ferreira JGRN, Krasheninnikova K; Darwin Tree of Life Consortium; Formenti G, Abueg L, Torrance J, Myers EW, Durbin R, Blaxter M, McCarthy SA. Uliano-Silva M, et al. Among authors: durbin r. BMC Bioinformatics. 2023 Jul 18;24(1):288. doi: 10.1186/s12859-023-05385-y. BMC Bioinformatics. 2023. PMID: 37464285 Free PMC article.
The variant call format and VCFtools.
Danecek P, Auton A, Abecasis G, Albers CA, Banks E, DePristo MA, Handsaker RE, Lunter G, Marth GT, Sherry ST, McVean G, Durbin R; 1000 Genomes Project Analysis Group. Danecek P, et al. Among authors: durbin r. Bioinformatics. 2011 Aug 1;27(15):2156-8. doi: 10.1093/bioinformatics/btr330. Epub 2011 Jun 7. Bioinformatics. 2011. PMID: 21653522 Free PMC article.
Genomic diversity of the African malaria vector Anopheles funestus.
Boddé M, Nwezeobi J, Korlević P, Makunin A, Akone-Ella O, Barasa S, Gadji M, Hart L, Kaindoa EW, Love K, Lucas ER, Lujumba I, Máquina M, Nagi S, Odero JO, Polo B, Sangbakembi C, Dadzie S, Koekemoer LL, Kwiatkowski D, McAlister E, Ochomo E, Okumu F, Paaijmans K, Tchouassi DP, Wondji CS, Ayala D, Durbin R, Miles A, Lawniczak MKN. Boddé M, et al. Among authors: durbin r. bioRxiv [Preprint]. 2024 Dec 17:2024.12.14.628470. doi: 10.1101/2024.12.14.628470. bioRxiv. 2024. PMID: 39763861 Free PMC article. Preprint.
520 results