Chan C - Search Results

1

Clustering Deviation Index (CDI): a robust and accurate internal measure for evaluating scRNA-seq data clustering.

Fang J, Chan C, Owzar K, Wang L, Qin D, Li QJ, Xie J. Fang J, et al. Among authors: chan c. Genome Biol. 2022 Dec 27;23(1):269. doi: 10.1186/s13059-022-02825-5. Genome Biol. 2022. PMID: 36575517 Free PMC article.

2

bcSeq: an R package for fast sequence mapping in high-throughput shRNA and CRISPR screens.

Lin J, Gresham J, Wang T, Kim SY, Alvarez J, Damrauer JS, Floyd S, Granek J, Allen A, Chan C, Xie J, Owzar K. Lin J, et al. Among authors: chan c. Bioinformatics. 2018 Oct 15;34(20):3581-3583. doi: 10.1093/bioinformatics/bty402. Bioinformatics. 2018. PMID: 29790906 Free PMC article.

3

Facilitating the Calculation of the Efficient Score Using Symbolic Computing.

Sibley A, Li Z, Jiang Y, Li YJ, Chan C, Allen A, Owzar K. Sibley A, et al. Among authors: chan c. Am Stat. 2018;72(2):199-205. doi: 10.1080/00031305.2017.1392361. Epub 2017 Oct 30. Am Stat. 2018. PMID: 30122786 Free PMC article.

4

fastJT: An R package for robust and efficient feature selection for machine learning and genome-wide association studies.

Lin J, Sibley A, Shterev I, Nixon A, Innocenti F, Chan C, Owzar K. Lin J, et al. Among authors: chan c. BMC Bioinformatics. 2019 Jun 13;20(1):333. doi: 10.1186/s12859-019-2869-3. BMC Bioinformatics. 2019. PMID: 31195980 Free PMC article.

5

Comparative analysis of RNA enrichment methods for preparation of Cryptococcus neoformans RNA sequencing libraries.

Telzrow CL, Zwack PJ, Esher Righi S, Dietrich FS, Chan C, Owzar K, Alspaugh JA, Granek JA. Telzrow CL, et al. Among authors: chan c. G3 (Bethesda). 2021 Oct 19;11(11):jkab301. doi: 10.1093/g3journal/jkab301. G3 (Bethesda). 2021. PMID: 34518880 Free PMC article.

6

Neuroimaging and immunological features of neurocognitive function related to substance use in people with HIV.

Murdoch DM, Barfield R, Chan C, Towe SL, Bell RP, Volkheimer A, Choe J, Hall SA, Berger M, Xie J, Meade CS. Murdoch DM, et al. Among authors: chan c. J Neurovirol. 2023 Feb;29(1):78-93. doi: 10.1007/s13365-022-01102-2. Epub 2022 Nov 8. J Neurovirol. 2023. PMID: 36348233 Free PMC article.

7

Immune Phenotype and Postoperative Complications After Elective Surgery.

Moris D, Barfield R, Chan C, Chasse S, Stempora L, Xie J, Plichta JK, Thacker J, Harpole DH, Purves T, Lagoo-Deenadayalan S, Hwang ES, Kirk AD. Moris D, et al. Among authors: chan c. Ann Surg. 2023 Dec 1;278(6):873-882. doi: 10.1097/SLA.0000000000005864. Epub 2023 Apr 13. Ann Surg. 2023. PMID: 37051915

8

SifiNet: a robust and accurate method to identify feature gene sets and annotate cells.

Gao Q, Ji Z, Wang L, Owzar K, Li QJ, Chan C, Xie J. Gao Q, et al. Among authors: chan c. Nucleic Acids Res. 2024 May 22;52(9):e46. doi: 10.1093/nar/gkae307. Nucleic Acids Res. 2024. PMID: 38647069 Free PMC article.

9

TEAM: A MULTIPLE TESTING ALGORITHM ON THE AGGREGATION TREE FOR FLOW CYTOMETRY ANALYSIS.

Pura JA, Li X, Chan C, Xie J. Pura JA, et al. Among authors: chan c. Ann Appl Stat. 2023 Mar;17(1):621-640. doi: 10.1214/22-aoas1645. Epub 2023 Jan 24. Ann Appl Stat. 2023. PMID: 38736649 Free PMC article.

10

Marker gene fishing for single-cell data with complex heterogeneity.

Shao Y, Gao Q, Wang L, Li D, Nixon AB, Chan C, Li QJ, Xie J. Shao Y, et al. Among authors: chan c. bioRxiv [Preprint]. 2024 Nov 6:2024.11.03.621735. doi: 10.1101/2024.11.03.621735. bioRxiv. 2024. PMID: 39574750 Free PMC article. Preprint.

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