Kolbeck PJ - Search Results

1

DNA fluctuations reveal the size and dynamics of topological domains.

Vanderlinden W, Skoruppa E, Kolbeck PJ, Carlon E, Lipfert J. Vanderlinden W, et al. Among authors: kolbeck pj. PNAS Nexus. 2022 Nov 22;1(5):pgac268. doi: 10.1093/pnasnexus/pgac268. eCollection 2022 Nov. PNAS Nexus. 2022. PMID: 36712371 Free PMC article.

2

Ru(TAP)32+ uses multivalent binding to accelerate and constrain photo-adduct formation on DNA.

Vanderlinden W , Kolbeck PJ , Frederickx W , Konrad SF , Nicolaus T , Lampe C , Urban AS , Moucheron C , Lipfert J . Vanderlinden W , et al. Among authors: kolbeck pj. Chem Commun (Camb). 2019 Jul 23;55(60):8764-8767. doi: 10.1039/c9cc02838b. Chem Commun (Camb). 2019. PMID: 31139806

3

The free energy landscape of retroviral integration.

Vanderlinden W, Brouns T, Walker PU, Kolbeck PJ, Milles LF, Ott W, Nickels PC, Debyser Z, Lipfert J. Vanderlinden W, et al. Among authors: kolbeck pj. Nat Commun. 2019 Oct 18;10(1):4738. doi: 10.1038/s41467-019-12649-w. Nat Commun. 2019. PMID: 31628321 Free PMC article.

4

A benchmark data set for the mechanical properties of double-stranded DNA and RNA under torsional constraint.

Vanderlinden W, Kolbeck PJ, Kriegel F, Walker PU, Lipfert J. Vanderlinden W, et al. Among authors: kolbeck pj. Data Brief. 2020 Mar 12;30:105404. doi: 10.1016/j.dib.2020.105404. eCollection 2020 Jun. Data Brief. 2020. PMID: 32309523 Free PMC article.

5

Molecular structure, DNA binding mode, photophysical properties and recommendations for use of SYBR Gold.

Kolbeck PJ, Vanderlinden W, Gemmecker G, Gebhardt C, Lehmann M, Lak A, Nicolaus T, Cordes T, Lipfert J. Kolbeck PJ, et al. Nucleic Acids Res. 2021 May 21;49(9):5143-5158. doi: 10.1093/nar/gkab265. Nucleic Acids Res. 2021. PMID: 33905507 Free PMC article.

6

Correction to 'Molecular structure, DNA binding mode, photophysical properties and recommendations for use of SYBR Gold'.

Kolbeck PJ, Vanderlinden W, Gemmecker G, Gebhardt C, Lehmann M, Lak A, Nicolaus T, Cordes T, Lipfert J. Kolbeck PJ, et al. Nucleic Acids Res. 2021 Dec 2;49(21):12601-12602. doi: 10.1093/nar/gkab1164. Nucleic Acids Res. 2021. PMID: 34850107 Free PMC article. No abstract available.

7

DNA Origami Fiducial for Accurate 3D Atomic Force Microscopy Imaging.

Kolbeck PJ, Dass M, Martynenko IV, van Dijk-Moes RJA, Brouwer KJH, van Blaaderen A, Vanderlinden W, Liedl T, Lipfert J. Kolbeck PJ, et al. Nano Lett. 2023 Feb 22;23(4):1236-1243. doi: 10.1021/acs.nanolett.2c04299. Epub 2023 Feb 6. Nano Lett. 2023. PMID: 36745573 Free PMC article.

8

Thermally Switchable Nanogate Based on Polymer Phase Transition.

Kolbeck PJ, Benaoudia D, Chazot-Franguiadakis L, Delecourt G, Mathé J, Li S, Bonnet R, Martin P, Lipfert J, Salvetti A, Boukhet M, Bennevault V, Lacroix JC, Guégan P, Montel F. Kolbeck PJ, et al. Nano Lett. 2023 Jun 14;23(11):4862-4869. doi: 10.1021/acs.nanolett.3c00438. Epub 2023 May 22. Nano Lett. 2023. PMID: 37212527

9

High-yield ligation-free assembly of DNA constructs with nucleosome positioning sequence repeats for single-molecule manipulation assays.

Lin YY, Brouns T, Kolbeck PJ, Vanderlinden W, Lipfert J. Lin YY, et al. Among authors: kolbeck pj. J Biol Chem. 2023 Jul;299(7):104874. doi: 10.1016/j.jbc.2023.104874. Epub 2023 May 29. J Biol Chem. 2023. PMID: 37257819 Free PMC article.

10

Supercoiling-dependent DNA binding: quantitative modeling and applications to bulk and single-molecule experiments.

Kolbeck PJ, Tišma M, Analikwu BT, Vanderlinden W, Dekker C, Lipfert J. Kolbeck PJ, et al. Nucleic Acids Res. 2024 Jan 11;52(1):59-72. doi: 10.1093/nar/gkad1055. Nucleic Acids Res. 2024. PMID: 38000393 Free PMC article.

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