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Multi-hallmark long noncoding RNA maps reveal non-small cell lung cancer vulnerabilities.
Esposito R, Polidori T, Meise DF, Pulido-Quetglas C, Chouvardas P, Forster S, Schaerer P, Kobel A, Schlatter J, Kerkhof E, Roemmele M, Rice ES, Zhu L, Lanzós A, Guillen-Ramirez HA, Basile G, Carrozzo I, Vancura A, Ullrich S, Andrades A, Harvey D, Medina PP, Ma PC, Haefliger S, Wang X, Martinez I, Ochsenbein AF, Riether C, Johnson R. Esposito R, et al. Among authors: chouvardas p. Cell Genom. 2022 Aug 22;2(9):100171. doi: 10.1016/j.xgen.2022.100171. eCollection 2022 Sep 14. Cell Genom. 2022. PMID: 36778670 Free PMC article.
An integrative transcriptome analysis framework for drug efficacy and similarity reveals drug-specific signatures of anti-TNF treatment in a mouse model of inflammatory polyarthritis.
Karagianni N, Kranidioti K, Fikas N, Tsochatzidou M, Chouvardas P, Denis MC, Kollias G, Nikolaou C. Karagianni N, et al. Among authors: chouvardas p. PLoS Comput Biol. 2019 May 9;15(5):e1006933. doi: 10.1371/journal.pcbi.1006933. eCollection 2019 May. PLoS Comput Biol. 2019. PMID: 31071076 Free PMC article.
LnCompare: gene set feature analysis for human long non-coding RNAs.
Carlevaro-Fita J, Liu L, Zhou Y, Zhang S, Chouvardas P, Johnson R, Li J. Carlevaro-Fita J, et al. Among authors: chouvardas p. Nucleic Acids Res. 2019 Jul 2;47(W1):W523-W529. doi: 10.1093/nar/gkz410. Nucleic Acids Res. 2019. PMID: 31147707 Free PMC article.
Assessment of the Cardiac Noncoding Transcriptome by Single-Cell RNA Sequencing Identifies FIXER, a Conserved Profibrogenic Long Noncoding RNA.
Aghagolzadeh P, Plaisance I, Bernasconi R, Treibel TA, Pulido Quetglas C, Wyss T, Wigger L, Nemir M, Sarre A, Chouvardas P, Johnson R, González A, Pedrazzini T. Aghagolzadeh P, et al. Among authors: chouvardas p. Circulation. 2023 Aug 29;148(9):778-797. doi: 10.1161/CIRCULATIONAHA.122.062601. Epub 2023 Jul 10. Circulation. 2023. PMID: 37427428 Free article.
25 results