Jansen PWTC - Search Results

1

Quantification of absolute transcription factor binding affinities in the native chromatin context using BANC-seq.

Neikes HK, Kliza KW, Gräwe C, Wester RA, Jansen PWTC, Lamers LA, Baltissen MP, van Heeringen SJ, Logie C, Teichmann SA, Lindeboom RGH, Vermeulen M. Neikes HK, et al. Among authors: jansen pwtc. Nat Biotechnol. 2023 Dec;41(12):1801-1809. doi: 10.1038/s41587-023-01715-w. Epub 2023 Mar 27. Nat Biotechnol. 2023. PMID: 36973556

2

A SILAC-based screen for Methyl-CpG binding proteins identifies RBP-J as a DNA methylation and sequence-specific binding protein.

Bartels SJ, Spruijt CG, Brinkman AB, Jansen PW, Vermeulen M, Stunnenberg HG. Bartels SJ, et al. PLoS One. 2011;6(10):e25884. doi: 10.1371/journal.pone.0025884. Epub 2011 Oct 3. PLoS One. 2011. PMID: 21991380 Free PMC article.

3

SS18 together with animal-specific factors defines human BAF-type SWI/SNF complexes.

Middeljans E, Wan X, Jansen PW, Sharma V, Stunnenberg HG, Logie C. Middeljans E, et al. PLoS One. 2012;7(3):e33834. doi: 10.1371/journal.pone.0033834. Epub 2012 Mar 19. PLoS One. 2012. PMID: 22442726 Free PMC article.

4

Stoichiometry of chromatin-associated protein complexes revealed by label-free quantitative mass spectrometry-based proteomics.

Smits AH, Jansen PW, Poser I, Hyman AA, Vermeulen M. Smits AH, et al. Nucleic Acids Res. 2013 Jan 7;41(1):e28. doi: 10.1093/nar/gks941. Epub 2012 Oct 12. Nucleic Acids Res. 2013. PMID: 23066101 Free PMC article.

5

Quantitative dissection and stoichiometry determination of the human SET1/MLL histone methyltransferase complexes.

van Nuland R, Smits AH, Pallaki P, Jansen PW, Vermeulen M, Timmers HT. van Nuland R, et al. Mol Cell Biol. 2013 May;33(10):2067-77. doi: 10.1128/MCB.01742-12. Epub 2013 Mar 18. Mol Cell Biol. 2013. PMID: 23508102 Free PMC article.

6

A dual role for SAGA-associated factor 29 (SGF29) in ER stress survival by coordination of both histone H3 acetylation and histone H3 lysine-4 trimethylation.

Schram AW, Baas R, Jansen PW, Riss A, Tora L, Vermeulen M, Timmers HT. Schram AW, et al. PLoS One. 2013 Jul 23;8(7):e70035. doi: 10.1371/journal.pone.0070035. Print 2013. PLoS One. 2013. PMID: 23894581 Free PMC article.

7

CBFB-MYH11/RUNX1 together with a compendium of hematopoietic regulators, chromatin modifiers and basal transcription factors occupies self-renewal genes in inv(16) acute myeloid leukemia.

Mandoli A, Singh AA, Jansen PW, Wierenga AT, Riahi H, Franci G, Prange K, Saeed S, Vellenga E, Vermeulen M, Stunnenberg HG, Martens JH. Mandoli A, et al. Leukemia. 2014 Apr;28(4):770-8. doi: 10.1038/leu.2013.257. Epub 2013 Sep 4. Leukemia. 2014. PMID: 24002588

8

Multivalent engagement of TFIID to nucleosomes.

van Nuland R, Schram AW, van Schaik FM, Jansen PW, Vermeulen M, Marc Timmers HT. van Nuland R, et al. PLoS One. 2013 Sep 11;8(9):e73495. doi: 10.1371/journal.pone.0073495. eCollection 2013. PLoS One. 2013. PMID: 24039962 Free PMC article.

9

MBD5 and MBD6 interact with the human PR-DUB complex through their methyl-CpG-binding domain.

Baymaz HI, Fournier A, Laget S, Ji Z, Jansen PW, Smits AH, Ferry L, Mensinga A, Poser I, Sharrocks A, Defossez PA, Vermeulen M. Baymaz HI, et al. Proteomics. 2014 Oct;14(19):2179-89. doi: 10.1002/pmic.201400013. Epub 2014 Apr 24. Proteomics. 2014. PMID: 24634419

10

Histone H2A monoubiquitination promotes histone H3 methylation in Polycomb repression.

Kalb R, Latwiel S, Baymaz HI, Jansen PW, Müller CW, Vermeulen M, Müller J. Kalb R, et al. Nat Struct Mol Biol. 2014 Jun;21(6):569-71. doi: 10.1038/nsmb.2833. Epub 2014 May 18. Nat Struct Mol Biol. 2014. PMID: 24837194

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