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Chromosome-Length Assembly of the Baikal Seal (Pusa sibirica) Genome Reveals a Historically Large Population Prior to Isolation in Lake Baikal.
Yakupova A, Tomarovsky A, Totikov A, Beklemisheva V, Logacheva M, Perelman PL, Komissarov A, Dobrynin P, Krasheninnikova K, Tamazian G, Serdyukova NA, Rayko M, Bulyonkova T, Cherkasov N, Pylev V, Peterfeld V, Penin A, Balanovska E, Lapidus A, Dna Zoo Consortium, OBrien SJ, Graphodatsky A, Koepfli KP, Kliver S. Yakupova A, et al. Among authors: lapidus a. Genes (Basel). 2023 Feb 28;14(3):619. doi: 10.3390/genes14030619. Genes (Basel). 2023. PMID: 36980891 Free PMC article.
Genome-wide Mycobacterium tuberculosis variation (GMTV) database: a new tool for integrating sequence variations and epidemiology.
Chernyaeva EN, Shulgina MV, Rotkevich MS, Dobrynin PV, Simonov SA, Shitikov EA, Ischenko DS, Karpova IY, Kostryukova ES, Ilina EN, Govorun VM, Zhuravlev VY, Manicheva OA, Yablonsky PK, Isaeva YD, Nosova EY, Mokrousov IV, Vyazovaya AA, Narvskaya OV, Lapidus AL, O'Brien SJ. Chernyaeva EN, et al. Among authors: lapidus al. BMC Genomics. 2014 Apr 25;15:308. doi: 10.1186/1471-2164-15-308. BMC Genomics. 2014. PMID: 24767249 Free PMC article.
Patterns and implications of gene gain and loss in the evolution of Prochlorococcus.
Kettler GC, Martiny AC, Huang K, Zucker J, Coleman ML, Rodrigue S, Chen F, Lapidus A, Ferriera S, Johnson J, Steglich C, Church GM, Richardson P, Chisholm SW. Kettler GC, et al. Among authors: lapidus a. PLoS Genet. 2007 Dec;3(12):e231. doi: 10.1371/journal.pgen.0030231. PLoS Genet. 2007. PMID: 18159947 Free PMC article.
plasmidSPAdes: assembling plasmids from whole genome sequencing data.
Antipov D, Hartwick N, Shen M, Raiko M, Lapidus A, Pevzner PA. Antipov D, et al. Among authors: lapidus a. Bioinformatics. 2016 Nov 15;32(22):3380-3387. doi: 10.1093/bioinformatics/btw493. Epub 2016 Jul 27. Bioinformatics. 2016. PMID: 27466620
428 results