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Developmental isoform diversity in the human neocortex informs neuropsychiatric risk mechanisms.
Patowary A, Zhang P, Jops C, Vuong CK, Ge X, Hou K, Kim M, Gong N, Margolis M, Vo D, Wang X, Liu C, Pasaniuc B, Li JJ, Gandal MJ, de la Torre-Ubieta L. Patowary A, et al. Among authors: kim m. bioRxiv [Preprint]. 2023 Oct 11:2023.03.25.534016. doi: 10.1101/2023.03.25.534016. bioRxiv. 2023. Update in: Science. 2024 May 24;384(6698):eadh7688. doi: 10.1126/science.adh7688 PMID: 36993726 Free PMC article. Updated. Preprint.
Engineering mtDNA Deletions by Reconstituting End-Joining in Human Mitochondria.
Fu Y, Land M, Cui R, Kavlashvili T, Kim M, Lieber T, Ryu KW, DeBitetto E, Masilionis I, Saha R, Takizawa M, Baker D, Tigano M, Reznik E, Sharma R, Chaligne R, Thompson CB, Pe'er D, Sfeir A. Fu Y, et al. Among authors: kim m. bioRxiv [Preprint]. 2024 Oct 17:2024.10.15.618543. doi: 10.1101/2024.10.15.618543. bioRxiv. 2024. PMID: 39463974 Free PMC article. Preprint.
Ongoing genome doubling promotes evolvability and immune dysregulation in ovarian cancer.
McPherson A, Vázquez-García I, Myers MA, Zatzman M, Al-Rawi D, Weiner A, Freeman S, Mohibullah N, Satas G, Williams MJ, Ceglia N, Zhang AW, Li J, Lim JLP, Wu M, Choi S, Havasov E, Grewal D, Shi H, Kim M, Schwarz R, Kaufmann T, Dinh KN, Uhlitz F, Tran J, Wu Y, Patel R, Ramakrishnan S, Kim D, Clarke J, Green H, Ali E, DiBona M, Varice N, Kundra R, Broach V, Gardner GJ, Roche KL, Sonoda Y, Zivanovic O, Kim SH, Grisham RN, Liu YL, Viale A, Rusk N, Lakhman Y, Ellenson LH, Tavaré S, Aparicio S, Chi DS, Aghajanian C, Abu-Rustum NR, Friedman CF, Zamarin D, Weigelt B, Bakhoum SF, Shah SP. McPherson A, et al. Among authors: kim d, kim sh, kim m. bioRxiv [Preprint]. 2024 Jul 15:2024.07.11.602772. doi: 10.1101/2024.07.11.602772. bioRxiv. 2024. PMID: 39071261 Free PMC article. Preprint.
Circadian rhythms of macrophages are altered by the acidic pH of the tumor microenvironment.
Knudsen-Clark AM, Mwangi D, Cazarin J, Morris K, Baker C, Hablitz LM, McCall MN, Kim M, Altman BJ. Knudsen-Clark AM, et al. Among authors: kim m. bioRxiv [Preprint]. 2024 Jul 24:2024.02.14.580339. doi: 10.1101/2024.02.14.580339. bioRxiv. 2024. Update in: EMBO Rep. 2024 Nov;25(11):5080-5112. doi: 10.1038/s44319-024-00288-2 PMID: 38405770 Free PMC article. Updated. Preprint.
Tumour mitochondrial DNA mutations drive aerobic glycolysis to enhance checkpoint blockade.
Mahmood M, Liu EM, Shergold AL, Tolla E, Tait-Mulder J, Huerta Uribe A, Shokry E, Young AL, Lilla S, Kim M, Park T, Manchon JL, Rodríguez-Antona C, Walters RC, Springett RJ, Blaza JN, Zanivan S, Sumpton D, Roberts EW, Reznik E, Gammage PA. Mahmood M, et al. Among authors: kim m. bioRxiv [Preprint]. 2023 Mar 23:2023.03.21.533091. doi: 10.1101/2023.03.21.533091. bioRxiv. 2023. Update in: Nat Cancer. 2024 Apr;5(4):659-672. doi: 10.1038/s43018-023-00721-w PMID: 36993533 Free PMC article. Updated. Preprint.
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