Kimura KD - Search Results

1

Seg2Link: an efficient and versatile solution for semi-automatic cell segmentation in 3D image stacks.

Wen C, Matsumoto M, Sawada M, Sawamoto K, Kimura KD. Wen C, et al. Among authors: kimura kd. Sci Rep. 2023 May 22;13(1):7109. doi: 10.1038/s41598-023-34232-6. Sci Rep. 2023. PMID: 37217545 Free PMC article.

2

Real-time volumetric microscopy of in vivo dynamics and large-scale samples with SCAPE 2.0.

Voleti V, Patel KB, Li W, Perez Campos C, Bharadwaj S, Yu H, Ford C, Casper MJ, Yan RW, Liang W, Wen C, Kimura KD, Targoff KL, Hillman EMC. Voleti V, et al. Among authors: kimura kd. Nat Methods. 2019 Oct;16(10):1054-1062. doi: 10.1038/s41592-019-0579-4. Epub 2019 Sep 27. Nat Methods. 2019. PMID: 31562489 Free PMC article.

3

3DeeCellTracker, a deep learning-based pipeline for segmenting and tracking cells in 3D time lapse images.

Wen C, Miura T, Voleti V, Yamaguchi K, Tsutsumi M, Yamamoto K, Otomo K, Fujie Y, Teramoto T, Ishihara T, Aoki K, Nemoto T, Hillman EM, Kimura KD. Wen C, et al. Among authors: kimura kd. Elife. 2021 Mar 30;10:e59187. doi: 10.7554/eLife.59187. Elife. 2021. PMID: 33781383 Free PMC article.

4

Tracking Moving Cells in 3D Time Lapse Images Using 3DeeCellTracker.

Wen C, Kimura KD. Wen C, et al. Among authors: kimura kd. Bio Protoc. 2022 Feb 20;12(4):e4319. doi: 10.21769/BioProtoc.4319. eCollection 2022 Feb 20. Bio Protoc. 2022. PMID: 35340289 Free PMC article.

5

Neuraminidase inhibition promotes the collective migration of neurons and recovery of brain function.

Matsumoto M, Matsushita K, Hane M, Wen C, Kurematsu C, Ota H, Bang Nguyen H, Quynh Thai T, Herranz-Pérez V, Sawada M, Fujimoto K, García-Verdugo JM, Kimura KD, Seki T, Sato C, Ohno N, Sawamoto K. Matsumoto M, et al. Among authors: kimura kd. EMBO Mol Med. 2024 Jun;16(6):1228-1253. doi: 10.1038/s44321-024-00073-7. Epub 2024 May 24. EMBO Mol Med. 2024. PMID: 38789599 Free PMC article.

6

In actio optophysiological analyses reveal functional diversification of dopaminergic neurons in the nematode C. elegans.

Tanimoto Y, Zheng YG, Fei X, Fujie Y, Hashimoto K, Kimura KD. Tanimoto Y, et al. Among authors: kimura kd. Sci Rep. 2016 May 19;6:26297. doi: 10.1038/srep26297. Sci Rep. 2016. PMID: 27193056 Free PMC article.

7

Slow Ca2+ dynamics in pharyngeal muscles in Caenorhabditis elegans during fast pumping.

Shimozono S, Fukano T, Kimura KD, Mori I, Kirino Y, Miyawaki A. Shimozono S, et al. Among authors: kimura kd. EMBO Rep. 2004 May;5(5):521-6. doi: 10.1038/sj.embor.7400142. Epub 2004 Apr 16. EMBO Rep. 2004. PMID: 15088067 Free PMC article.

8

Deep learning-assisted comparative analysis of animal trajectories with DeepHL.

Maekawa T, Ohara K, Zhang Y, Fukutomi M, Matsumoto S, Matsumura K, Shidara H, Yamazaki SJ, Fujisawa R, Ide K, Nagaya N, Yamazaki K, Koike S, Miyatake T, Kimura KD, Ogawa H, Takahashi S, Yoda K. Maekawa T, et al. Among authors: kimura kd. Nat Commun. 2020 Oct 20;11(1):5316. doi: 10.1038/s41467-020-19105-0. Nat Commun. 2020. PMID: 33082335 Free PMC article.

9

Calcium Imaging of Neuronal Activity under Gradually Changing Odor Stimulation in Caenorhabditis elegans.

Tanimoto Y, Kimura KD. Tanimoto Y, et al. Among authors: kimura kd. Bio Protoc. 2021 Jan 5;11(1):e3866. doi: 10.21769/BioProtoc.3866. eCollection 2021 Jan 5. Bio Protoc. 2021. PMID: 33732757 Free PMC article.

10

Cross-species behavior analysis with attention-based domain-adversarial deep neural networks.

Maekawa T, Higashide D, Hara T, Matsumura K, Ide K, Miyatake T, Kimura KD, Takahashi S. Maekawa T, et al. Among authors: kimura kd. Nat Commun. 2021 Sep 17;12(1):5519. doi: 10.1038/s41467-021-25636-x. Nat Commun. 2021. PMID: 34535659 Free PMC article.

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