Levy ED - Search Results

1

Discriminating physiological from non-physiological interfaces in structures of protein complexes: A community-wide study.

Schweke H, Xu Q, Tauriello G, Pantolini L, Schwede T, Cazals F, Lhéritier A, Fernandez-Recio J, Rodríguez-Lumbreras LA, Schueler-Furman O, Varga JK, Jiménez-García B, Réau MF, Bonvin AMJJ, Savojardo C, Martelli PL, Casadio R, Tubiana J, Wolfson HJ, Oliva R, Barradas-Bautista D, Ricciardelli T, Cavallo L, Venclovas Č, Olechnovič K, Guerois R, Andreani J, Martin J, Wang X, Terashi G, Sarkar D, Christoffer C, Aderinwale T, Verburgt J, Kihara D, Marchand A, Correia BE, Duan R, Qiu L, Xu X, Zhang S, Zou X, Dey S, Dunbrack RL, Levy ED, Wodak SJ. Schweke H, et al. Among authors: levy ed. Proteomics. 2023 Sep;23(17):e2200323. doi: 10.1002/pmic.202200323. Epub 2023 Jun 27. Proteomics. 2023. PMID: 37365936 Free PMC article.

2

PDB-wide identification of physiological hetero-oligomeric assemblies based on conserved quaternary structure geometry.

Dey S, Levy ED. Dey S, et al. Among authors: levy ed. Structure. 2021 Nov 4;29(11):1303-1311.e3. doi: 10.1016/j.str.2021.07.012. Epub 2021 Sep 13. Structure. 2021. PMID: 34520740 Free PMC article.

3

Inferring and Using Protein Quaternary Structure Information from Crystallographic Data.

Dey S, Levy ED. Dey S, et al. Among authors: levy ed. Methods Mol Biol. 2018;1764:357-375. doi: 10.1007/978-1-4939-7759-8_23. Methods Mol Biol. 2018. PMID: 29605927

4

PDB-wide identification of biological assemblies from conserved quaternary structure geometry.

Dey S, Ritchie DW, Levy ED. Dey S, et al. Among authors: levy ed. Nat Methods. 2018 Jan;15(1):67-72. doi: 10.1038/nmeth.4510. Epub 2017 Nov 20. Nat Methods. 2018. PMID: 29155427

5

QSalignWeb: A Server to Predict and Analyze Protein Quaternary Structure.

Dey S, Prilusky J, Levy ED. Dey S, et al. Among authors: levy ed. Front Mol Biosci. 2022 Jan 5;8:787510. doi: 10.3389/fmolb.2021.787510. eCollection 2021. Front Mol Biosci. 2022. PMID: 35071324 Free PMC article. Review.

6

Geometric description of self-interaction potential in symmetric protein complexes.

Empereur-Mot C, Garcia-Seisdedos H, Elad N, Dey S, Levy ED. Empereur-Mot C, et al. Among authors: levy ed. Sci Data. 2019 May 17;6(1):64. doi: 10.1038/s41597-019-0058-x. Sci Data. 2019. PMID: 31101822 Free PMC article.

7

Structural, evolutionary, and assembly principles of protein oligomerization.

Levy ED, Teichmann S. Levy ED, et al. Prog Mol Biol Transl Sci. 2013;117:25-51. doi: 10.1016/B978-0-12-386931-9.00002-7. Prog Mol Biol Transl Sci. 2013. PMID: 23663964 Review.

8

Synthetic condensate size correlates with yeast replicative cell age.

Heidenreich M, Georgeson JM, Nadav Y, Levy ED. Heidenreich M, et al. Among authors: levy ed. MicroPubl Biol. 2022 Jun 3;2022:10.17912/micropub.biology.000582. doi: 10.17912/micropub.biology.000582. eCollection 2022. MicroPubl Biol. 2022. PMID: 35673323 Free PMC article.

9

A unified statistical potential reveals that amino acid stickiness governs nonspecific recruitment of client proteins into condensates.

Villegas JA, Levy ED. Villegas JA, et al. Among authors: levy ed. Protein Sci. 2022 Jul;31(7):e4361. doi: 10.1002/pro.4361. Protein Sci. 2022. PMID: 35762716 Free PMC article.

10

Abundance Imparts Evolutionary Constraints of Similar Magnitude on the Buried, Surface, and Disordered Regions of Proteins.

Dubreuil B, Levy ED. Dubreuil B, et al. Among authors: levy ed. Front Mol Biosci. 2021 Apr 30;8:626729. doi: 10.3389/fmolb.2021.626729. eCollection 2021. Front Mol Biosci. 2021. PMID: 33996892 Free PMC article.

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