Mitra E - Search Results

1

Computational microscopy for fast widefield deep-tissue fluorescence imaging using a commercial dual-cannula probe.

Mitra E, Guo R, Nelson S, Nagarajan N, Menon R. Mitra E, et al. Opt Contin. 2022 Sep 15;1(9):2091-2099. doi: 10.1364/optcon.469219. Opt Contin. 2022. PMID: 37378086 Free PMC article.

2

Oral Nano-Curcumin in a Model of Chronic Gulf War Illness Alleviates Brain Dysfunction with Modulation of Oxidative Stress, Mitochondrial Function, Neuroinflammation, Neurogenesis, and Gene Expression.

Attaluri S, Arora M, Madhu LN, Kodali M, Shuai B, Melissari L, Upadhya R, Rao X, Bates A, Mitra E, Ghahfarouki KR, Ravikumar MNV, Shetty AK. Attaluri S, et al. Among authors: mitra e. Aging Dis. 2022 Apr 1;13(2):583-613. doi: 10.14336/AD.2021.0829. eCollection 2022 Apr. Aging Dis. 2022. PMID: 35371600 Free PMC article.

3

Parameter Estimation and Uncertainty Quantification for Systems Biology Models.

Mitra ED, Hlavacek WS. Mitra ED, et al. Curr Opin Syst Biol. 2019 Dec;18:9-18. doi: 10.1016/j.coisb.2019.10.006. Epub 2019 Nov 6. Curr Opin Syst Biol. 2019. PMID: 32719822 Free PMC article.

4

Bayesian inference using qualitative observations of underlying continuous variables.

Mitra ED, Hlavacek WS. Mitra ED, et al. Bioinformatics. 2020 May 1;36(10):3177-3184. doi: 10.1093/bioinformatics/btaa084. Bioinformatics. 2020. PMID: 32049328 Free PMC article.

5

Multisite EGFR phosphorylation is regulated by adaptor protein abundances and dimer lifetimes.

Salazar-Cavazos E, Nitta CF, Mitra ED, Wilson BS, Lidke KA, Hlavacek WS, Lidke DS. Salazar-Cavazos E, et al. Among authors: mitra ed. Mol Biol Cell. 2020 Mar 19;31(7):695-708. doi: 10.1091/mbc.E19-09-0548. Epub 2020 Jan 8. Mol Biol Cell. 2020. PMID: 31913761 Free PMC article.

6

A Model of Chronic Temporal Lobe Epilepsy Presenting Constantly Rhythmic and Robust Spontaneous Seizures, Co-morbidities and Hippocampal Neuropathology.

Upadhya D, Kodali M, Gitai D, Castro OW, Zanirati G, Upadhya R, Attaluri S, Mitra E, Shuai B, Hattiangady B, Shetty AK. Upadhya D, et al. Among authors: mitra e. Aging Dis. 2019 Oct 1;10(5):915-936. doi: 10.14336/AD.2019.0720. eCollection 2019 Oct. Aging Dis. 2019. PMID: 31595192 Free PMC article.

7

PyBioNetFit and the Biological Property Specification Language.

Mitra ED, Suderman R, Colvin J, Ionkov A, Hu A, Sauro HM, Posner RG, Hlavacek WS. Mitra ED, et al. iScience. 2019 Sep 27;19:1012-1036. doi: 10.1016/j.isci.2019.08.045. Epub 2019 Aug 28. iScience. 2019. PMID: 31522114 Free PMC article.

8

A Step-by-Step Guide to Using BioNetFit.

Hlavacek WS, Csicsery-Ronay JA, Baker LR, Ramos Álamo MDC, Ionkov A, Mitra ED, Suderman R, Erickson KE, Dias R, Colvin J, Thomas BR, Posner RG. Hlavacek WS, et al. Among authors: mitra ed. Methods Mol Biol. 2019;1945:391-419. doi: 10.1007/978-1-4939-9102-0_18. Methods Mol Biol. 2019. PMID: 30945257

9

Using both qualitative and quantitative data in parameter identification for systems biology models.

Mitra ED, Dias R, Posner RG, Hlavacek WS. Mitra ED, et al. Nat Commun. 2018 Sep 25;9(1):3901. doi: 10.1038/s41467-018-06439-z. Nat Commun. 2018. PMID: 30254246 Free PMC article.

10

Generalizing Gillespie's Direct Method to Enable Network-Free Simulations.

Suderman R, Mitra ED, Lin YT, Erickson KE, Feng S, Hlavacek WS. Suderman R, et al. Among authors: mitra ed. Bull Math Biol. 2019 Aug;81(8):2822-2848. doi: 10.1007/s11538-018-0418-2. Epub 2018 Mar 28. Bull Math Biol. 2019. PMID: 29594824 Free PMC article.

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