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Comprehensive tissue deconvolution of cell-free DNA by deep learning for disease diagnosis and monitoring.
Li S, Zeng W, Ni X, Liu Q, Li W, Stackpole ML, Zhou Y, Gower A, Krysan K, Ahuja P, Lu DS, Raman SS, Hsu W, Aberle DR, Magyar CE, French SW, Han SB, Garon EB, Agopian VG, Wong WH, Dubinett SM, Zhou XJ. Li S, et al. Among authors: liu q. Proc Natl Acad Sci U S A. 2023 Jul 11;120(28):e2305236120. doi: 10.1073/pnas.2305236120. Epub 2023 Jul 3. Proc Natl Acad Sci U S A. 2023. PMID: 37399400 Free PMC article.
Density estimation using deep generative neural networks.
Liu Q, Xu J, Jiang R, Wong WH. Liu Q, et al. Proc Natl Acad Sci U S A. 2021 Apr 13;118(15):e2101344118. doi: 10.1073/pnas.2101344118. Proc Natl Acad Sci U S A. 2021. PMID: 33833061 Free PMC article.
EpiGePT: a Pretrained Transformer model for epigenomics.
Gao Z, Liu Q, Zeng W, Jiang R, Wong WH. Gao Z, et al. Among authors: liu q. bioRxiv [Preprint]. 2024 Feb 3:2023.07.15.549134. doi: 10.1101/2023.07.15.549134. bioRxiv. 2024. PMID: 37502861 Free PMC article. Preprint.
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