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OME-Zarr: a cloud-optimized bioimaging file format with international community support.
Moore J, Basurto-Lozada D, Besson S, Bogovic J, Bragantini J, Brown EM, Burel JM, Casas Moreno X, de Medeiros G, Diel EE, Gault D, Ghosh SS, Gold I, Halchenko YO, Hartley M, Horsfall D, Keller MS, Kittisopikul M, Kovacs G, Küpcü Yoldaş A, Kyoda K, le Tournoulx de la Villegeorges A, Li T, Liberali P, Lindner D, Linkert M, Lüthi J, Maitin-Shepard J, Manz T, Marconato L, McCormick M, Lange M, Mohamed K, Moore W, Norlin N, Ouyang W, Özdemir B, Palla G, Pape C, Pelkmans L, Pietzsch T, Preibisch S, Prete M, Rzepka N, Samee S, Schaub N, Sidky H, Solak AC, Stirling DR, Striebel J, Tischer C, Toloudis D, Virshup I, Walczysko P, Watson AM, Weisbart E, Wong F, Yamauchi KA, Bayraktar O, Cimini BA, Gehlenborg N, Haniffa M, Hotaling N, Onami S, Royer LA, Saalfeld S, Stegle O, Theis FJ, Swedlow JR. Moore J, et al. Among authors: lindner d. Histochem Cell Biol. 2023 Sep;160(3):223-251. doi: 10.1007/s00418-023-02209-1. Epub 2023 Jul 10. Histochem Cell Biol. 2023. PMID: 37428210 Free PMC article.
OME-NGFF: a next-generation file format for expanding bioimaging data-access strategies.
Moore J, Allan C, Besson S, Burel JM, Diel E, Gault D, Kozlowski K, Lindner D, Linkert M, Manz T, Moore W, Pape C, Tischer C, Swedlow JR. Moore J, et al. Among authors: lindner d. Nat Methods. 2021 Dec;18(12):1496-1498. doi: 10.1038/s41592-021-01326-w. Epub 2021 Nov 29. Nat Methods. 2021. PMID: 34845388 Free PMC article.
Bringing Open Data to Whole Slide Imaging.
Besson S, Leigh R, Linkert M, Allan C, Burel JM, Carroll M, Gault D, Gozim R, Li S, Lindner D, Moore J, Moore W, Walczysko P, Wong F, Swedlow JR. Besson S, et al. Among authors: lindner d. Digit Pathol (2019). 2019 Apr;2019:3-10. doi: 10.1007/978-3-030-23937-4_1. Epub 2019 Jul 3. Digit Pathol (2019). 2019. PMID: 31579322 Free PMC article.
Publishing and sharing multi-dimensional image data with OMERO.
Burel JM, Besson S, Blackburn C, Carroll M, Ferguson RK, Flynn H, Gillen K, Leigh R, Li S, Lindner D, Linkert M, Moore WJ, Ramalingam B, Rozbicki E, Tarkowska A, Walczysko P, Allan C, Moore J, Swedlow JR. Burel JM, et al. Among authors: lindner d. Mamm Genome. 2015 Oct;26(9-10):441-7. doi: 10.1007/s00335-015-9587-6. Epub 2015 Jul 30. Mamm Genome. 2015. PMID: 26223880 Free PMC article.
Metadata management for high content screening in OMERO.
Li S, Besson S, Blackburn C, Carroll M, Ferguson RK, Flynn H, Gillen K, Leigh R, Lindner D, Linkert M, Moore WJ, Ramalingam B, Rozbicki E, Rustici G, Tarkowska A, Walczysko P, Williams E, Allan C, Burel JM, Moore J, Swedlow JR. Li S, et al. Among authors: lindner d. Methods. 2016 Mar 1;96:27-32. doi: 10.1016/j.ymeth.2015.10.006. Epub 2015 Oct 22. Methods. 2016. PMID: 26476368 Free PMC article.
The effect of rotator cuff repair on sleep quality: Influencing factors and the impact of narcotic medication on postoperative sleep patterns: A systematic review and meta-analysis.
Mozes AD, Danilkowicz RM, Haichin LS, Gonzalez F, Yona T, Lindner D, Beer Y, Garrigues GE, Gilat R. Mozes AD, et al. Among authors: lindner d. Shoulder Elbow. 2024 Dec 19:17585732241298247. doi: 10.1177/17585732241298247. Online ahead of print. Shoulder Elbow. 2024. PMID: 39713260 Free PMC article.
Cell-autonomous IL6ST activation suppresses prostate cancer development via STAT3/ARF/p53-driven senescence and confers an immune-active tumor microenvironment.
Sternberg C, Raigel M, Limberger T, Trachtová K, Schlederer M, Lindner D, Kodajova P, Yang J, Ziegler R, Kalla J, Stoiber S, Dey S, Zwolanek D, Neubauer HA, Oberhuber M, Redmer T, Hejret V, Tichy B, Tomberger M, Harbusch NS, Pencik J, Tangermann S, Bystry V, Persson JL, Egger G, Pospisilova S, Eferl R, Wolf P, Sternberg F, Högler S, Lagger S, Rose-John S, Kenner L. Sternberg C, et al. Among authors: lindner d. Mol Cancer. 2024 Oct 31;23(1):245. doi: 10.1186/s12943-024-02114-8. Mol Cancer. 2024. PMID: 39482716 Free PMC article.
Chronic Activation of Tubulin Tyrosination Improves Heart Function.
Pietsch N, Chen CY, Kupsch S, Bacmeister L, Geertz B, Herrera-Rivero M, Siebels B, Voß H, Krämer E, Braren I, Westermann D, Schlüter H, Mearini G, Schlossarek S, van der Velden J, Caporizzo MA, Lindner D, Prosser BL, Carrier L. Pietsch N, et al. Among authors: lindner d. Circ Res. 2024 Oct 11;135(9):910-932. doi: 10.1161/CIRCRESAHA.124.324387. Epub 2024 Sep 16. Circ Res. 2024. PMID: 39279670 Free PMC article.
514 results