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Integration of population-level data sources into an individual-level clinical prediction model for dengue virus test positivity.
Williams RJ, Brintz BJ, Santos GRD, Huang A, Buddhari D, Kaewhiran S, Iamsirithaworn S, Rothman AL, Thomas S, Farmer A, Fernandez S, Cummings DAT, Anderson KB, Salje H, Leung DT. Williams RJ, et al. Among authors: salje h. medRxiv [Preprint]. 2023 Aug 13:2023.08.08.23293840. doi: 10.1101/2023.08.08.23293840. medRxiv. 2023. Update in: Sci Adv. 2024 Feb 16;10(7):eadj9786. doi: 10.1126/sciadv.adj9786 PMID: 37609267 Free PMC article. Updated. Preprint.
Reconciling heterogeneous dengue virus infection risk estimates from different study designs.
Huang AT, Buddhari D, Kaewhiran S, Iamsirithaworn S, Khampaen D, Farmer A, Fernandez S, Thomas SJ, Barraquer IR, Hunsawong T, Srikiatkhachorn A, Dos Santos GR, O'Driscoll M, Hamins-Puertolas M, Endy T, Rothman AL, Cummings DAT, Anderson K, Salje H. Huang AT, et al. Among authors: salje h. medRxiv [Preprint]. 2024 Sep 10:2024.09.09.24313375. doi: 10.1101/2024.09.09.24313375. medRxiv. 2024. PMID: 39314937 Free PMC article. Preprint.
Learning the fitness dynamics of pathogens from phylogenies.
Lefrancq N, Duret L, Bouchez V, Brisse S, Parkhill J, Salje H. Lefrancq N, et al. Among authors: salje h. Nature. 2025 Jan 1. doi: 10.1038/s41586-024-08309-9. Online ahead of print. Nature. 2025. PMID: 39743587
Reconciling heterogeneous dengue virus infection risk estimates from different study designs.
Huang AT, Buddhari D, Kaewhiran S, Iamsirithaworn S, Khampaen D, Farmer A, Fernandez S, Thomas SJ, Rodriguez-Barraquer I, Hunsawong T, Srikiatkhachorn A, Ribeiro Dos Santos G, O'Driscoll M, Hamins-Puertolas M, Endy T, Rothman AL, Cummings DAT, Anderson K, Salje H. Huang AT, et al. Among authors: salje h. Proc Natl Acad Sci U S A. 2025 Jan 7;122(1):e2411768121. doi: 10.1073/pnas.2411768121. Epub 2024 Dec 31. Proc Natl Acad Sci U S A. 2025. PMID: 39739790
Linking multiple serological assays to infer dengue virus infections from paired samples using mixture models.
Hamins-Puértolas M, Buddhari D, Salje H, Huang AT, Hunsawong T, Cummings DAT, Fernandez S, Farmer A, Kaewhiran S, Khampaen D, Srikiatkhachorn A, Iamsirithaworn S, Waickman A, Thomas SJ, Endy T, Rothman AL, Anderson KB, Rodriguez-Barraquer I. Hamins-Puértolas M, et al. Among authors: salje h. medRxiv [Preprint]. 2024 Dec 10:2024.12.08.24318683. doi: 10.1101/2024.12.08.24318683. medRxiv. 2024. PMID: 39711706 Free PMC article. Preprint.
A systematic review of using population-level human mobility data to understand SARS-CoV-2 transmission.
Kostandova N, Schluth C, Arambepola R, Atuhaire F, Bérubé S, Chin T, Cleary E, Cortes-Azuero O, García-Carreras B, Grantz KH, Hitchings MDT, Huang AT, Kishore N, Lai S, Larsen SL, Loisate S, Martinez P, Meredith HR, Purbey R, Ramiadantsoa T, Read J, Rice BL, Rosman L, Ruktanonchai N, Salje H, Schaber KL, Tatem AJ, Wang J, Cummings DAT, Wesolowski A. Kostandova N, et al. Among authors: salje h. Nat Commun. 2024 Dec 3;15(1):10504. doi: 10.1038/s41467-024-54895-7. Nat Commun. 2024. PMID: 39627231 Free PMC article.
Challenges and Approaches to Establishing Multi-Pathogen Serosurveillance: Findings from the 2023 Serosurveillance Summit.
Carcelen AC, Kong AC, Takahashi S, Hegde S, Jaenisch T, Chu M, Rochford R, Kostandova N, Gurley ES, Wesolowski A, Azman AS, van der Klis FRM, den Hartog G, Drakeley C, Heaney CD, Winter AK, Salje H, Rodriguez-Barraquer I, Leung DT, Njenga SM, Kagucia EW, Jambo KC, Wolter N, Charles RC, Saboyá-Díaz MI, Martin DL, Moss WJ. Carcelen AC, et al. Among authors: salje h. Am J Trop Med Hyg. 2024 Sep 3;111(5):1145-1152. doi: 10.4269/ajtmh.24-0296. Print 2024 Nov 6. Am J Trop Med Hyg. 2024. PMID: 39226906 Free PMC article.
Informing an investment case for Japanese encephalitis vaccine introduction in Bangladesh.
Duque MP, Naser AM, Dos Santos GR, O'Driscoll M, Paul KK, Rahman M, Alam MS, Al-Amin HM, Rahman MZ, Hossain ME, Paul RC, Luby SP, Cauchemez S, Vanhomwegen J, Gurley ES, Salje H. Duque MP, et al. Among authors: salje h. Sci Adv. 2024 Aug 9;10(32):eadp1657. doi: 10.1126/sciadv.adp1657. Epub 2024 Aug 9. Sci Adv. 2024. PMID: 39121225 Free PMC article.
137 results