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eQTL Catalogue 2023: New datasets, X chromosome QTLs, and improved detection and visualisation of transcript-level QTLs.
Kerimov N, Tambets R, Hayhurst JD, Rahu I, Kolberg P, Raudvere U, Kuzmin I, Chowdhary A, Vija A, Teras HJ, Kanai M, Ulirsch J, Ryten M, Hardy J, Guelfi S, Trabzuni D, Kim-Hellmuth S, Rayner W, Finucane H, Peterson H, Mosaku A, Parkinson H, Alasoo K. Kerimov N, et al. Among authors: kuzmin i. PLoS Genet. 2023 Sep 18;19(9):e1010932. doi: 10.1371/journal.pgen.1010932. eCollection 2023 Sep. PLoS Genet. 2023. PMID: 37721944 Free PMC article.
Systematic visualisation of molecular QTLs reveals variant mechanisms at GWAS loci.
Kerimov N, Tambets R, Hayhurst JD, Rahu I, Kolberg P, Raudvere U, Kuzmin I, Chowdhary A, Vija A, Teras HJ, Kanai M, Ulirsch J, Ryten M, Hardy J, Guelfi S, Trabzuni D, Kim-Hellmuth S, Rayner W, Finucane H, Peterson H, Mosaku A, Parkinson H, Alasoo K. Kerimov N, et al. Among authors: kuzmin i. bioRxiv [Preprint]. 2023 Apr 7:2023.04.06.535816. doi: 10.1101/2023.04.06.535816. bioRxiv. 2023. Update in: PLoS Genet. 2023 Sep 18;19(9):e1010932. doi: 10.1371/journal.pgen.1010932 PMID: 37066341 Free PMC article. Updated. Preprint.
The interplay of DNA repair context with target sequence predictably biases Cas9-generated mutations.
Pallaseni A, Peets EM, Girling G, Crepaldi L, Kuzmin I, Moor M, Muñoz-Subirana N, Schimmel J, Serçin Ö, Mardin BR, Tijsterman M, Peterson H, Kosicki M, Parts L. Pallaseni A, et al. Among authors: kuzmin i. bioRxiv [Preprint]. 2024 Sep 14:2023.06.28.546891. doi: 10.1101/2023.06.28.546891. bioRxiv. 2024. Update in: Nat Commun. 2024 Nov 27;15(1):10271. doi: 10.1038/s41467-024-54566-7 PMID: 37425722 Free PMC article. Updated. Preprint.
SARS-CoV-2 clade dynamics and their associations with hospitalisations during the first two years of the COVID-19 pandemic.
Päll T, Abroi A, Avi R, Niglas H, Shablinskaja A, Pauskar M, Jõgeda EL, Soeorg H, Kallas E, Lahesaare A, Truusalu K, Hoidmets D, Sadikova O, Ratnik K, Sepp H, Dotsenko L, Epštein J, Suija H, Kaarna K, Smit S, Milani L, Metspalu M, Oopkaup OE, Koppel I, Jaaniso E, Kuzmin I, Inno H, Raudvere U, Härma MA, Naaber P, Reisberg T, Peterson H, Talas UG, Lutsar I, Huik K. Päll T, et al. Among authors: kuzmin i. PLoS One. 2024 May 10;19(5):e0303176. doi: 10.1371/journal.pone.0303176. eCollection 2024. PLoS One. 2024. PMID: 38728305 Free PMC article.
Comparison of uridine and N1-methylpseudouridine mRNA platforms in development of an Andes virus vaccine.
Kuzmin IV, Soto Acosta R, Pruitt L, Wasdin PT, Kedarinath K, Hernandez KR, Gonzales KA, Hill K, Weidner NG, Mire C, Engdahl TB, Moon WJ, Popov V, Crowe JE Jr, Georgiev IS, Garcia-Blanco MA, Abbott RK, Bukreyev A. Kuzmin IV, et al. Nat Commun. 2024 Jul 30;15(1):6421. doi: 10.1038/s41467-024-50774-3. Nat Commun. 2024. PMID: 39080316 Free PMC article.
280 results