Chen L - Search Results

1

Single-cell RNA sequencing reveals a hierarchical transcriptional regulatory network of terpenoid biosynthesis in cotton secretory glandular cells.

Lin JL, Chen L, Wu WK, Guo XX, Yu CH, Xu M, Nie GB, Dun JL, Li Y, Xu B, Wang LJ, Chen XY, Gao W, Huang JQ. Lin JL, et al. Among authors: chen xy, chen l. Mol Plant. 2023 Dec 4;16(12):1990-2003. doi: 10.1016/j.molp.2023.10.008. Epub 2023 Oct 17. Mol Plant. 2023. PMID: 37849250 Free article.

2

DeepEdit: single-molecule detection and phasing of A-to-I RNA editing events using nanopore direct RNA sequencing.

Chen L, Ou L, Jing X, Kong Y, Xie B, Zhang N, Shi H, Qin H, Li X, Hao P. Chen L, et al. Genome Biol. 2023 Apr 17;24(1):75. doi: 10.1186/s13059-023-02921-0. Genome Biol. 2023. PMID: 37069604 Free PMC article.

3

Revealing the novel complexity of plant long non-coding RNA by strand-specific and whole transcriptome sequencing for evolutionarily representative plant species.

Zhu Y, Chen L, Hong X, Shi H, Li X. Zhu Y, et al. Among authors: chen l. BMC Genomics. 2022 May 19;23(Suppl 4):381. doi: 10.1186/s12864-022-08602-9. BMC Genomics. 2022. PMID: 35590257 Free PMC article.

4

DENA: training an authentic neural network model using Nanopore sequencing data of Arabidopsis transcripts for detection and quantification of N⁶-methyladenosine on RNA.

Qin H, Ou L, Gao J, Chen L, Wang JW, Hao P, Li X. Qin H, et al. Among authors: chen l. Genome Biol. 2022 Jan 17;23(1):25. doi: 10.1186/s13059-021-02598-3. Genome Biol. 2022. PMID: 35039061 Free PMC article.

5

Global transcriptome analysis reveals extensive gene remodeling, alternative splicing and differential transcription profiles in non-seed vascular plant Selaginella moellendorffii.

Zhu Y, Chen L, Zhang C, Hao P, Jing X, Li X. Zhu Y, et al. Among authors: chen l. BMC Genomics. 2017 Jan 25;18(Suppl 1):1042. doi: 10.1186/s12864-016-3266-1. BMC Genomics. 2017. PMID: 28198676 Free PMC article.

6

The Landscape of A-to-I RNA Editome Is Shaped by Both Positive and Purifying Selection.

Yu Y, Zhou H, Kong Y, Pan B, Chen L, Wang H, Hao P, Li X. Yu Y, et al. Among authors: chen l. PLoS Genet. 2016 Jul 28;12(7):e1006191. doi: 10.1371/journal.pgen.1006191. eCollection 2016 Jul. PLoS Genet. 2016. PMID: 27467689 Free PMC article.

7

Implementation of the CRISPR-Cas13a system in fission yeast and its repurposing for precise RNA editing.

Jing X, Xie B, Chen L, Zhang N, Jiang Y, Qin H, Wang H, Hao P, Yang S, Li X. Jing X, et al. Among authors: chen l. Nucleic Acids Res. 2018 Sep 6;46(15):e90. doi: 10.1093/nar/gky433. Nucleic Acids Res. 2018. PMID: 29860393 Free PMC article.

8

The evolutionary landscape of intergenic trans-splicing events in insects.

Kong Y, Zhou H, Yu Y, Chen L, Hao P, Li X. Kong Y, et al. Among authors: chen l. Nat Commun. 2015 Nov 2;6:8734. doi: 10.1038/ncomms9734. Nat Commun. 2015. PMID: 26521696 Free PMC article.

9

Expanding the Coverage of Metabolic Landscape in Cultivated Rice with Integrated Computational Approaches.

Li X, Zhou H, Xiao N, Wu X, Shan Y, Chen L, Wang C, Wang Z, Huang J, Li A, Li X. Li X, et al. Among authors: chen l. Genomics Proteomics Bioinformatics. 2022 Aug;20(4):702-714. doi: 10.1016/j.gpb.2020.06.018. Epub 2021 Feb 23. Genomics Proteomics Bioinformatics. 2022. PMID: 33631426 Free PMC article.

10

Decipher the ancestry of the plant-specific LBD gene family.

Kong Y, Xu P, Jing X, Chen L, Li L, Li X. Kong Y, et al. Among authors: chen l. BMC Genomics. 2017 Jan 25;18(Suppl 1):951. doi: 10.1186/s12864-016-3264-3. BMC Genomics. 2017. PMID: 28198677 Free PMC article.

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