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Impact of AlphaFold on structure prediction of protein complexes: The CASP15-CAPRI experiment.
Lensink MF, Brysbaert G, Raouraoua N, Bates PA, Giulini M, Honorato RV, van Noort C, Teixeira JMC, Bonvin AMJJ, Kong R, Shi H, Lu X, Chang S, Liu J, Guo Z, Chen X, Morehead A, Roy RS, Wu T, Giri N, Quadir F, Chen C, Cheng J, Del Carpio CA, Ichiishi E, Rodriguez-Lumbreras LA, Fernandez-Recio J, Harmalkar A, Chu LS, Canner S, Smanta R, Gray JJ, Li H, Lin P, He J, Tao H, Huang SY, Roel-Touris J, Jimenez-Garcia B, Christoffer CW, Jain AJ, Kagaya Y, Kannan H, Nakamura T, Terashi G, Verburgt JC, Zhang Y, Zhang Z, Fujuta H, Sekijima M, Kihara D, Khan O, Kotelnikov S, Ghani U, Padhorny D, Beglov D, Vajda S, Kozakov D, Negi SS, Ricciardelli T, Barradas-Bautista D, Cao Z, Chawla M, Cavallo L, Oliva R, Yin R, Cheung M, Guest JD, Lee J, Pierce BG, Shor B, Cohen T, Halfon M, Schneidman-Duhovny D, Zhu S, Yin R, Sun Y, Shen Y, Maszota-Zieleniak M, Bojarski KK, Lubecka EA, Marcisz M, Danielsson A, Dziadek L, Gaardlos M, Gieldon A, Liwo A, Samsonov SA, Slusarz R, Zieba K, Sieradzan AK, Czaplewski C, Kobayashi S, Miyakawa Y, Kiyota Y, Takeda-Shitaka M, Olechnovic K, Valancauskas L, Dapkunas J, Venclovas C, Wallner B, Yang L, Hou C, He X, Guo S, Jiang S, Ma X, Duan R, Qui L, Xu X, Zou X, Vela… See abstract for full author list ➔ Lensink MF, et al. Among authors: ma x. Proteins. 2023 Dec;91(12):1658-1683. doi: 10.1002/prot.26609. Epub 2023 Oct 31. Proteins. 2023. PMID: 37905971 Free PMC article.
Structure relaxation via long trajectories made stable.
Yang L, Hou C, Ma X, Ye L, Chang L, Shi L, He X. Yang L, et al. Among authors: ma x. Phys Chem Chem Phys. 2017 Sep 20;19(36):24478-24484. doi: 10.1039/c7cp04838f. Phys Chem Chem Phys. 2017. PMID: 28890963
Entropy-Enthalpy Compensations Fold Proteins in Precise Ways.
Li J, Hou C, Ma X, Guo S, Zhang H, Shi L, Liao C, Zheng B, Ye L, Yang L, He X. Li J, et al. Among authors: ma x. Int J Mol Sci. 2021 Sep 6;22(17):9653. doi: 10.3390/ijms22179653. Int J Mol Sci. 2021. PMID: 34502559 Free PMC article.
Thermal transport across the CoSb3-graphene interface.
Yin K, Shi L, Zhong Y, Ma X, Li M, He X. Yin K, et al. Among authors: ma x. Phys Chem Chem Phys. 2023 Jan 18;25(3):2517-2522. doi: 10.1039/d2cp01885c. Phys Chem Chem Phys. 2023. PMID: 36602119
34,496 results
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