Al Nasr K - Search Results

1

Exploring the microbial diversity and characterization of cellulase and hemicellulase genes in goat rumen: a metagenomic approach.

Thapa S, Zhou S, O'Hair J, Al Nasr K, Ropelewski A, Li H. Thapa S, et al. Among authors: al nasr k. BMC Biotechnol. 2023 Dec 4;23(1):51. doi: 10.1186/s12896-023-00821-6. BMC Biotechnol. 2023. PMID: 38049781 Free PMC article.

2

Mathematical and Machine Learning Approaches for Classification of Protein Secondary Structure Elements from Cα Coordinates.

Sekmen A, Al Nasr K, Bilgin B, Koku AB, Jones C. Sekmen A, et al. Among authors: al nasr k. Biomolecules. 2023 May 31;13(6):923. doi: 10.3390/biom13060923. Biomolecules. 2023. PMID: 37371503 Free PMC article.

3

Editorial: Special Issue "Protein Modeling and Simulation: Selected Articles from the Computational Structural Bioinformatics Workshop 2021".

Forouzesh N, Al Nasr K. Forouzesh N, et al. Among authors: al nasr k. Biomolecules. 2023 Feb 22;13(3):408. doi: 10.3390/biom13030408. Biomolecules. 2023. PMID: 36979343 Free PMC article.

4

LPTD: a novel linear programming-based topology determination method for cryo-EM maps.

Behkamal B, Naghibzadeh M, Pagnani A, Saberi MR, Al Nasr K. Behkamal B, et al. Among authors: al nasr k. Bioinformatics. 2022 May 13;38(10):2734-2741. doi: 10.1093/bioinformatics/btac170. Bioinformatics. 2022. PMID: 35561171 Free PMC article.

5

Three-Dimensional Graph Matching to Identify Secondary Structure Correspondence of Medium-Resolution Cryo-EM Density Maps.

Behkamal B, Naghibzadeh M, Saberi MR, Tehranizadeh ZA, Pagnani A, Al Nasr K. Behkamal B, et al. Among authors: al nasr k. Biomolecules. 2021 Nov 26;11(12):1773. doi: 10.3390/biom11121773. Biomolecules. 2021. PMID: 34944417 Free PMC article.

6

Solving the α-helix correspondence problem at medium-resolution Cryo-EM maps through modeling and 3D matching.

Behkamal B, Naghibzadeh M, Pagnani A, Saberi MR, Al Nasr K. Behkamal B, et al. Among authors: al nasr k. J Mol Graph Model. 2021 Mar;103:107815. doi: 10.1016/j.jmgm.2020.107815. Epub 2020 Nov 28. J Mol Graph Model. 2021. PMID: 33338845

7

Analytical Approaches to Improve Accuracy in Solving the Protein Topology Problem.

Al Nasr K, Yousef F, Jebril R, Jones C. Al Nasr K, et al. Molecules. 2018 Jan 23;23(2):28. doi: 10.3390/molecules23020028. Molecules. 2018. PMID: 29360779 Free PMC article.

8

Special Issue Preface: The 9th Computational Structural Bioinformatics Workshop.

He J, Al Nasr K, Sun W, Lu Y. He J, et al. Among authors: al nasr k. J Comput Biol. 2018 Jan;25(1):1-2. doi: 10.1089/cmb.2018.29010.jh. J Comput Biol. 2018. PMID: 29313734 No abstract available.

9

PEM-fitter: A Coarse-Grained Method to Validate Protein Candidate Models.

Al Nasr K, Jones C, Yousef F, Jebril R. Al Nasr K, et al. J Comput Biol. 2018 Jan;25(1):21-32. doi: 10.1089/cmb.2017.0191. Epub 2017 Nov 15. J Comput Biol. 2018. PMID: 29140718

10

Solving the Secondary Structure Matching Problem in Cryo-EM De Novo Modeling Using a Constrained K-Shortest Path Graph Algorithm.

Al Nasr K, Ranjan D, Zubair M, Chen L, He J. Al Nasr K, et al. IEEE/ACM Trans Comput Biol Bioinform. 2014 Mar-Apr;11(2):419-30. doi: 10.1109/TCBB.2014.2302803. IEEE/ACM Trans Comput Biol Bioinform. 2014. PMID: 26355788

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