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Randomly barcoded transposon mutant libraries for gut commensals I: Strategies for efficient library construction.
Tripathi S, Voogdt CGP, Bassler SO, Anderson M, Huang PH, Sakenova N, Capraz T, Jain S, Koumoutsi A, Bravo AM, Trotter V, Zimmerman M, Sonnenburg JL, Buie C, Typas A, Deutschbauer AM, Shiver AL, Huang KC. Tripathi S, et al. Among authors: typas a. Cell Rep. 2024 Jan 23;43(1):113517. doi: 10.1016/j.celrep.2023.113517. Epub 2023 Dec 23. Cell Rep. 2024. PMID: 38142397 Free article. Review.
Randomly barcoded transposon mutant libraries for gut commensals II: Applying libraries for functional genetics.
Voogdt CGP, Tripathi S, Bassler SO, McKeithen-Mead SA, Guiberson ER, Koumoutsi A, Bravo AM, Buie C, Zimmermann M, Sonnenburg JL, Typas A, Deutschbauer AM, Shiver AL, Huang KC. Voogdt CGP, et al. Among authors: typas a. Cell Rep. 2024 Jan 23;43(1):113519. doi: 10.1016/j.celrep.2023.113519. Epub 2023 Dec 23. Cell Rep. 2024. PMID: 38142398 Free article. Review.
Salmonella infection impacts host proteome thermal stability.
Birk MS, Walch P, Baykara T, Sefried S, Amelang J, Buerova E, Breuer I, Vervoorts J, Typas A, Savitski MM, Mateus A, Selkrig J. Birk MS, et al. Among authors: typas a. Eur J Cell Biol. 2024 Dec;103(4):151448. doi: 10.1016/j.ejcb.2024.151448. Epub 2024 Aug 6. Eur J Cell Biol. 2024. PMID: 39128247 Free article.
Principles of bacterial innate immunity against viruses.
Laub MT, Typas A. Laub MT, et al. Among authors: typas a. Curr Opin Immunol. 2024 Aug;89:102445. doi: 10.1016/j.coi.2024.102445. Epub 2024 Aug 12. Curr Opin Immunol. 2024. PMID: 39137494 Free article. Review.
Author Correction: Examining the healthy human microbiome concept.
Joos R, Boucher K, Lavelle A, Arumugam M, Blaser MJ, Claesson MJ, Clarke G, Cotter PD, De Sordi L, Dominguez-Bello MG, Dutilh BE, Ehrlich SD, Ghosh TS, Hill C, Junot C, Lahti L, Lawley TD, Licht TR, Maguin E, Makhalanyane TP, Marchesi JR, Matthijnssens J, Raes J, Ravel J, Salonen A, Scanlan PD, Shkoporov A, Stanton C, Thiele I, Tolstoy I, Walter J, Yang B, Yutin N, Zhernakova A, Zwart H; Human Microbiome Action Consortium; Doré J, Ross RP. Joos R, et al. Nat Rev Microbiol. 2024 Dec 16. doi: 10.1038/s41579-024-01145-8. Online ahead of print. Nat Rev Microbiol. 2024. PMID: 39681696 No abstract available.
Examining the healthy human microbiome concept.
Joos R, Boucher K, Lavelle A, Arumugam M, Blaser MJ, Claesson MJ, Clarke G, Cotter PD, De Sordi L, Dominguez-Bello MG, Dutilh BE, Ehrlich SD, Ghosh TS, Hill C, Junot C, Lahti L, Lawley TD, Licht TR, Maguin E, Makhalanyane TP, Marchesi JR, Matthijnssens J, Raes J, Ravel J, Salonen A, Scanlan PD, Shkoporov A, Stanton C, Thiele I, Tolstoy I, Walter J, Yang B, Yutin N, Zhernakova A, Zwart H; Human Microbiome Action Consortium; Doré J, Ross RP. Joos R, et al. Nat Rev Microbiol. 2024 Oct 23. doi: 10.1038/s41579-024-01107-0. Online ahead of print. Nat Rev Microbiol. 2024. PMID: 39443812 Review.
LD-transpeptidation is crucial for fitness and polar growth in Agrobacterium tumefaciens.
Aliashkevich A, Guest T, Alvarez L, Gilmore MC, Rea D, Amstutz J, Mateus A, Schiffthaler B, Ruiz I, Typas A, Savitski MM, Brown PJB, Cava F. Aliashkevich A, et al. Among authors: typas a. PLoS Genet. 2024 Oct 21;20(10):e1011449. doi: 10.1371/journal.pgen.1011449. eCollection 2024 Oct. PLoS Genet. 2024. PMID: 39432536 Free PMC article.
Emergence of community behaviors in the gut microbiota upon drug treatment.
Garcia-Santamarina S, Kuhn M, Devendran S, Maier L, Driessen M, Mateus A, Mastrorilli E, Brochado AR, Savitski MM, Patil KR, Zimmermann M, Bork P, Typas A. Garcia-Santamarina S, et al. Among authors: typas a. Cell. 2024 Oct 31;187(22):6346-6357.e20. doi: 10.1016/j.cell.2024.08.037. Epub 2024 Sep 24. Cell. 2024. PMID: 39321801 Free article.
87 results