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Spatiotemporal dynamics and epidemiological impact of SARS-CoV-2 XBB lineage dissemination in Brazil in 2023.
Arantes I, Gomes M, Ito K, Sarafim S, Gräf T, Miyajima F, Khouri R, de Carvalho FC, de Almeida WAF, Siqueira MM, Resende PC, Naveca FG, Bello G; COVID-19 Fiocruz Genomic Surveillance Network. Arantes I, et al. Among authors: ito k. Microbiol Spectr. 2024 Mar 5;12(3):e0383123. doi: 10.1128/spectrum.03831-23. Epub 2024 Feb 5. Microbiol Spectr. 2024. PMID: 38315011 Free PMC article.
Comparative epidemic expansion of SARS-CoV-2 variants Delta and Omicron in the Brazilian State of Amazonas.
Arantes I, Bello G, Nascimento V, Souza V, da Silva A, Silva D, Nascimento F, Mejía M, Brandão MJ, Gonçalves L, Silva G, da Costa CF, Abdalla L, Santos JH, Ramos TCA, Piantham C, Ito K, Siqueira MM, Resende PC, Wallau GL, Delatorre E, Gräf T, Naveca FG. Arantes I, et al. Among authors: ito k. Nat Commun. 2023 Apr 11;14(1):2048. doi: 10.1038/s41467-023-37541-6. Nat Commun. 2023. PMID: 37041143 Free PMC article.
Rapid spread of the SARS-CoV-2 Omicron XDR lineage derived from recombination between XBB and BA.2.86 subvariants circulating in Brazil in late 2023.
Arantes I, Ito K, Gomes M, Carvalho FCd, Ferreira de Almeida WA, Khouri R, Miyajima F, Wallau GL, Naveca FG, Pereira EC; COVID-19 Fiocruz Genomic Surveillance Network; Mendonça Siqueira M, Resende PC, Bello G. Arantes I, et al. Among authors: ito k. Microbiol Spectr. 2025 Jan 7;13(1):e0119324. doi: 10.1128/spectrum.01193-24. Epub 2024 Nov 29. Microbiol Spectr. 2025. PMID: 39611827 Free PMC article.
Prognostic value of systemic immune-inflammation index in patients with small-cell lung cancer treated with immune checkpoint inhibitors.
Hamakawa Y, Hirahara A, Hayashi A, Ito K, Shinohara H, Shiba A, Higashi Y, Aga M, Miyazaki K, Taniguchi Y, Misumi Y, Agemi Y, Nakamura Y, Shimokawa T, Okamoto H. Hamakawa Y, et al. Among authors: ito k. BMC Cancer. 2025 Jan 6;25(1):17. doi: 10.1186/s12885-025-13440-5. BMC Cancer. 2025. PMID: 39762819 Free PMC article.
Blood DNA virome associates with autoimmune diseases and COVID-19.
Sasa N, Kojima S, Koide R, Hasegawa T, Namkoong H, Hirota T, Watanabe R, Nakamura Y, Oguro-Igashira E, Ogawa K, Yata T, Sonehara K, Yamamoto K, Kishikawa T, Sakaue S, Edahiro R, Shirai Y, Maeda Y, Nii T, Chubachi S, Tanaka H, Yabukami H, Suzuki A, Nakajima K, Arase N, Okamoto T, Nishikawa R, Namba S, Naito T, Miyagawa I, Tanaka H, Ueno M, Ishitsuka Y, Furuta J, Kunimoto K, Kajihara I, Fukushima S, Miyachi H, Matsue H, Kamata M, Momose M, Bito T, Nagai H, Ikeda T, Horikawa T, Adachi A, Matsubara T, Ikumi K, Nishida E, Nakagawa I, Yagita-Sakamaki M, Yoshimura M, Ohshima S, Kinoshita M, Ito S, Arai T, Hirose M, Tanino Y, Nikaido T, Ichiwata T, Ohkouchi S, Hirano T, Takada T, Tazawa R, Morimoto K, Takaki M, Konno S, Suzuki M, Tomii K, Nakagawa A, Handa T, Tanizawa K, Ishii H, Ishida M, Kato T, Takeda N, Yokomura K, Matsui T, Uchida A, Inoue H, Imaizumi K, Goto Y, Kida H, Fujisawa T, Suda T, Yamada T, Satake Y, Ibata H, Saigusa M, Shirai T, Hizawa N, Nakata K; Japan COVID-19 Task Force; Imafuku S, Tada Y, Asano Y, Sato S, Nishigori C, Jinnin M, Ihn H, Asahina A, Saeki H, Kawamura T, Shimada S, Katayama I, Poisner HM, Mack TM, Bick AG, Higasa K, Okuno T, Mochizuki H, Ishii M, Koike R, K… See abstract for full author list ➔ Sasa N, et al. Nat Genet. 2025 Jan 3. doi: 10.1038/s41588-024-02022-z. Online ahead of print. Nat Genet. 2025. PMID: 39753770
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