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Deconvolution of single-cell multi-omics layers reveals regulatory heterogeneity.
Liu L, Liu C, Quintero A, Wu L, Yuan Y, Wang M, Cheng M, Leng L, Xu L, Dong G, Li R, Liu Y, Wei X, Xu J, Chen X, Lu H, Chen D, Wang Q, Zhou Q, Lin X, Li G, Liu S, Wang Q, Wang H, Fink JL, Gao Z, Liu X, Hou Y, Zhu S, Yang H, Ye Y, Lin G, Chen F, Herrmann C, Eils R, Shang Z, Xu X. Liu L, et al. Among authors: yuan y. Nat Commun. 2019 Jan 28;10(1):470. doi: 10.1038/s41467-018-08205-7. Nat Commun. 2019. PMID: 30692544 Free PMC article.
An ATAC-seq atlas of chromatin accessibility in mouse tissues.
Liu C, Wang M, Wei X, Wu L, Xu J, Dai X, Xia J, Cheng M, Yuan Y, Zhang P, Li J, Feng T, Chen A, Zhang W, Chen F, Shang Z, Zhang X, Peters BA, Liu L. Liu C, et al. Among authors: yuan y. Sci Data. 2019 May 20;6(1):65. doi: 10.1038/s41597-019-0071-0. Sci Data. 2019. PMID: 31110271 Free PMC article.
Chromatin accessibility and transcriptome landscapes of Monomorium pharaonis brain.
Wang M, Liu Y, Wen T, Liu W, Gao Q, Zhao J, Xiong Z, Wang Z, Jiang W, Yu Y, Wu L, Yuan Y, Wei X, Xu J, Cheng M, Zhang P, Li P, Hou Y, Yang H, Zhang G, Li Q, Liu C, Liu L. Wang M, et al. Among authors: yuan y. Sci Data. 2020 Jul 8;7(1):217. doi: 10.1038/s41597-020-0556-x. Sci Data. 2020. PMID: 32641764 Free PMC article.
Single-Cell Sequencing of Peripheral Mononuclear Cells Reveals Distinct Immune Response Landscapes of COVID-19 and Influenza Patients.
Zhu L, Yang P, Zhao Y, Zhuang Z, Wang Z, Song R, Zhang J, Liu C, Gao Q, Xu Q, Wei X, Sun HX, Ye B, Wu Y, Zhang N, Lei G, Yu L, Yan J, Diao G, Meng F, Bai C, Mao P, Yu Y, Wang M, Yuan Y, Deng Q, Li Z, Huang Y, Hu G, Liu Y, Wang X, Xu Z, Liu P, Bi Y, Shi Y, Zhang S, Chen Z, Wang J, Xu X, Wu G, Wang FS, Gao GF, Liu L, Liu WJ. Zhu L, et al. Among authors: yuan y. Immunity. 2020 Sep 15;53(3):685-696.e3. doi: 10.1016/j.immuni.2020.07.009. Epub 2020 Jul 19. Immunity. 2020. PMID: 32783921 Free PMC article.
An ATAC-seq Dataset Uncovers the Regulatory Landscape During Axolotl Limb Regeneration.
Wei X, Li H, Guo Y, Zhao X, Liu Y, Zou X, Zhou L, Yuan Y, Qin Y, Mao C, Huang G, Yu Y, Deng Q, Feng W, Xu J, Wang M, Liu S, Yang H, Liu L, Liu C, Gu Y. Wei X, et al. Among authors: yuan y. Front Cell Dev Biol. 2021 Mar 30;9:651145. doi: 10.3389/fcell.2021.651145. eCollection 2021. Front Cell Dev Biol. 2021. PMID: 33869207 Free PMC article. No abstract available.
The Chromatin Accessibility Landscape of Adult Rat.
Yuan Y, Deng Q, Wei X, Liu Y, Lan Q, Jiang Y, Yu Y, Guo P, Xu J, Yu C, Han L, Cheng M, Wu P, Zhang X, Lai Y, Volpe G, Esteban MA, Yang H, Liu C, Liu L. Yuan Y, et al. Front Genet. 2021 May 24;12:651604. doi: 10.3389/fgene.2021.651604. eCollection 2021. Front Genet. 2021. PMID: 34108989 Free PMC article. No abstract available.
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